Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0358
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   9.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 592 CWARATDRFSSKEHAAT*VLLLSCVRHMVNA*RFPW 485
           CW   + + +SKE     + L +CVR   N   +PW
Sbjct: 492 CWVPHSCKLTSKEVPGETINLQTCVRCPNN---YPW 524


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 245 LKKSWNGRKRYCSRYW 292
           LK    G + YC RYW
Sbjct: 31  LKSKVVGDETYCDRYW 46


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = -3

Query: 368 TKFGPYLVSNI--CALICLFRTASLV 297
           +KF P+L+SNI   +LI LF    ++
Sbjct: 230 SKFEPFLISNISLVSLIFLFNCTLII 255


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 167 QSTVNANGETKRQRTSYTRYQT 188


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 QYTIN*ENSTVKSATAITRYRT 176
           Q T+N    T +  T+ TRY+T
Sbjct: 211 QSTVNANGETKRQRTSYTRYQT 232


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 344 SNICALICLFRTASLVTSSTGNNISFGHSSFSSITLTFQDRECCSV 207
           S +  ++ LFRTA+ + +S        + + +S+   F     C V
Sbjct: 255 SFLSIVLALFRTAAELQASQIKWTRIAYMALASVPFIFDSIHLCDV 300


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 344 SNICALICLFRTASLVTSSTGNNISFGHSSFSSITLTFQDRECCSV 207
           S +  ++ LFRTA+ + +S        + + +S+   F     C V
Sbjct: 273 SFLSIVLALFRTAAELQASQIKWTRIAYMALASVPFIFDSIHLCDV 318


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 117 TIN*ENSTVKSATAITRYRT 176
           T+N    T +  T+ TRY+T
Sbjct: 1   TVNANGETKRQRTSYTRYQT 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,251
Number of Sequences: 336
Number of extensions: 3280
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)