Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0358
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z82282-6|CAB05273.1| 147|Caenorhabditis elegans Hypothetical pr... 29 2.4
AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidas... 29 3.2
AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical ... 29 3.2
Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 5.6
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+ E L+WP E L PVLD R+A+ + +N+ D + G V L+ +L D PA++
Sbjct: 648 SAFEMSLQWPVEHLTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADV 705
Query: 418 ---MLTMRVLVNAFSDLPGEML 474
+L R + NAFS G L
Sbjct: 706 ALKVLVCRCIANAFSHPVGRNL 727
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+ E L+WP E L PVLD R+A+ + +N+ D + G V L+ +L D PA++
Sbjct: 646 SAFEMSLQWPVEHLTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADV 703
Query: 418 ---MLTMRVLVNAFSDLPGEML 474
+L R + NAFS G L
Sbjct: 704 ALKVLVCRCIANAFSHPVGRNL 725
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+ E L+WP E L PVLD R+A+ + +N+ D + G V L+ +L D PA++
Sbjct: 648 SAFEMSLQWPVEHLTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADV 705
Query: 418 ---MLTMRVLVNAFSDLPGEML 474
+L R + NAFS G L
Sbjct: 706 ALKVLVCRCIANAFSHPVGRNL 727
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+ E L+WP E L PVLD R+A+ + +N+ D + G V L+ +L D PA++
Sbjct: 646 SAFEMSLQWPVEHLTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADV 703
Query: 418 ---MLTMRVLVNAFSDLPGEML 474
+L R + NAFS G L
Sbjct: 704 ALKVLVCRCIANAFSHPVGRNL 725
>Z82282-6|CAB05273.1| 147|Caenorhabditis elegans Hypothetical
protein T07G12.8 protein.
Length = 147
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 441 HQHSHCQHYVCR*VVWRQQCEQILDKVRSVFSVEHLCVDLFVPDSQPCYIQYREQYLFRP 262
HQH+H +C+ + I D R V S +C+D V P I + Y F
Sbjct: 4 HQHAHVDCDICQLDDYSSPTSTITDSCRLVASERVICIDKPV----PIRIIF---YFFSN 56
Query: 261 FQLFFNNVNV 232
F LFF + +
Sbjct: 57 FILFFYKIKI 66
>AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidase
protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 395 GANNVSRYWTKFGPYLVSN 339
GA+ SRYW + PY+++N
Sbjct: 284 GADGASRYWNRLKPYILNN 302
>AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical
protein Y70D2A.2 protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 395 GANNVSRYWTKFGPYLVSN 339
GA+ SRYW + PY+++N
Sbjct: 284 GADGASRYWNRLKPYILNN 302
>Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical
protein C09F12.2 protein.
Length = 604
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 316 NKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+K+ ++ D KYGP F ++++T P LP +I
Sbjct: 216 DKEEKKRILDNKYGPKFERFIVT-FHPRGLPGDI 248
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 104 IKAIYDKLREFNSKVGDGHNPLS----DEQLQNVVKLGELNSTHDPETLTLLKKSWN 262
+ ++ RE + K+ + H S DE+ + + + +S+ D E TL+ K W+
Sbjct: 347 VNTFHENARELHDKMSNVHGEFSKVYTDEEAKKIHNILPYDSSSDYENTTLVNKWWD 403
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,248,485
Number of Sequences: 27780
Number of extensions: 314603
Number of successful extensions: 890
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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