Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0357
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.0  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   9.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 432  ACPVRYMTRTYDVIERNFKEIFA 500
            +C +RY+T T+     NFK IF+
Sbjct: 2236 SCIMRYVTATFINAASNFKNIFS 2258


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 242  CIRHIQQRIQLSHSA*LHWGCSS 174
            C R  ++R+QL+ S  +  GCS+
Sbjct: 988  CPRFAEERLQLNESCRVEVGCSN 1010


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -1

Query: 375 RTRSALIYSGTHSSYIDRISYLLAKYIINGYSLTISDFFLLNLKLYTPHSAAH 217
           +T  A +    +  + + I+Y  A+YI N  +  + D F L     T H   H
Sbjct: 587 QTGRARVLLNDNPLHCNCIAYAFAQYIQNRLATAVYDRFELVANELTCHGPEH 639


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,152
Number of Sequences: 2352
Number of extensions: 13737
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)