Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0356
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021309-1|AAX33457.1|  169|Drosophila melanogaster RE15376p pro...    55   8e-08
AE014134-2393|AAN10847.1|  163|Drosophila melanogaster CG16890-P...    55   8e-08
AE014134-2392|AAF53327.1|  258|Drosophila melanogaster CG16890-P...    55   8e-08
AY118316-1|AAM48345.1|  247|Drosophila melanogaster GM20271p pro...    54   2e-07
BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p pro...    32   0.65 
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA...    32   0.65 

>BT021309-1|AAX33457.1|  169|Drosophila melanogaster RE15376p
           protein.
          Length = 169

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 LRNLNPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDV-ADT 507
           L NL+  E H Y+++ Y LN    T     ++ R + D+DVIRENH+FLWEDD++ +DT
Sbjct: 17  LNNLSAKERHNYILSNYVLNLPNET-----ESRRHKRDIDVIRENHRFLWEDDELDSDT 70



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = +3

Query: 510 EKQLAKKYHDKLFKEYCICDLSRYKENRVS 599
           E++LA +Y+ KLFKEYCI DLSRYKEN+++
Sbjct: 74  EQRLALRYYRKLFKEYCIADLSRYKENKIA 103


>AE014134-2393|AAN10847.1|  163|Drosophila melanogaster CG16890-PB,
           isoform B protein.
          Length = 163

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 LRNLNPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDV-ADT 507
           L NL+  E H Y+++ Y LN    T     ++ R + D+DVIRENH+FLWEDD++ +DT
Sbjct: 11  LNNLSAKERHNYILSNYVLNLPNET-----ESRRHKRDIDVIRENHRFLWEDDELDSDT 64



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = +3

Query: 510 EKQLAKKYHDKLFKEYCICDLSRYKENRVS 599
           E++LA +Y+ KLFKEYCI DLSRYKEN+++
Sbjct: 68  EQRLALRYYRKLFKEYCIADLSRYKENKIA 97


>AE014134-2392|AAF53327.1|  258|Drosophila melanogaster CG16890-PA,
           isoform A protein.
          Length = 258

 Score = 55.2 bits (127), Expect = 8e-08
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 LRNLNPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDV-ADT 507
           L NL+  E H Y+++ Y LN    T     ++ R + D+DVIRENH+FLWEDD++ +DT
Sbjct: 11  LNNLSAKERHNYILSNYVLNLPNET-----ESRRHKRDIDVIRENHRFLWEDDELDSDT 64



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = +3

Query: 510 EKQLAKKYHDKLFKEYCICDLSRYKENRVS 599
           E++LA +Y+ KLFKEYCI DLSRYKEN+++
Sbjct: 68  EQRLALRYYRKLFKEYCIADLSRYKENKIA 97


>AY118316-1|AAM48345.1|  247|Drosophila melanogaster GM20271p
           protein.
          Length = 247

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = +1

Query: 340 NLNPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDV-ADT 507
           NL+  E H Y+++ Y LN    T     ++ R + D+DVIRENH+FLWEDD++ +DT
Sbjct: 2   NLSAKERHNYILSNYVLNLPNET-----ESRRHKRDIDVIRENHRFLWEDDELDSDT 53



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = +3

Query: 510 EKQLAKKYHDKLFKEYCICDLSRYKENRVS 599
           E++LA +Y+ KLFKEYCI DLSRYKEN+++
Sbjct: 57  EQRLALRYYRKLFKEYCIADLSRYKENKIA 86


>BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p
           protein.
          Length = 623

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 346 NPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDVAD 504
           +P EL   L+ + S   K    R KRD  R  +  D+I   H  +  DDD+ D
Sbjct: 215 DPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINRVHPAISNDDDIDD 267


>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
           protein.
          Length = 1301

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 346 NPYELHKYLVNVYSLNTKGSTTRLKRDTSRDRTDLDVIRENHKFLWEDDDVAD 504
           +P EL   L+ + S   K    R KRD  R  +  D+I   H  +  DDD+ D
Sbjct: 314 DPAELKLRLIALKSAILKKHLARKKRDAERAYSPTDMINRVHPAISNDDDIDD 366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,105,992
Number of Sequences: 53049
Number of extensions: 532404
Number of successful extensions: 1144
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)