Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0353
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2; Trypanosoma...    35   2.0  
UniRef50_Q4Z2H9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_UPI00006CFA90 Cluster: phospholipid-translocating P-typ...    33   6.1  
UniRef50_A5E2G1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  

>UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2;
           Trypanosoma|Rep: Helicase-like protein - Trypanosoma
           brucei
          Length = 1009

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -3

Query: 365 LIKGPSTFVLKPNKNVPQKNRNGGNSFPRSK 273
           +I+ PS FVL  +  +P+KNRNG +S P S+
Sbjct: 563 IIQKPSAFVLSISDPLPEKNRNGQDSVPSSE 593


>UniRef50_Q4Z2H9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 107

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 557 LHVERIPYFFCIFGIYTIFL-YFCFCSAFF 643
           +H+ +I Y FC + IY ++L Y  FC  FF
Sbjct: 8   MHISKIVYMFCNYQIYYLYLVYILFCVYFF 37


>UniRef50_UPI00006CFA90 Cluster: phospholipid-translocating P-type
           ATPase, flippase family protein; n=1; Tetrahymena
           thermophila SB210|Rep: phospholipid-translocating P-type
           ATPase, flippase family protein - Tetrahymena
           thermophila SB210
          Length = 412

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -1

Query: 331 LIKTFHKKIETGEIHFHVQNLLTNVLTLYSITPFGVSVFVILFTSSNHSSYSKLYDALTN 152
           +I  FHK +      F      + ++   SI P  + +FVILF  +N+ S  + YD+  N
Sbjct: 144 IILYFHKMMHGCPFFFQ-----SEIVVCLSI-PLLLDIFVILFKEANYYSKQRKYDSQIN 197

Query: 151 SIKWCTKLI 125
               C KL+
Sbjct: 198 DSNECQKLV 206


>UniRef50_A5E2G1 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1125

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -1

Query: 307 IETGEIHFHVQNLLTNVLT-LYSITPFGVSVFVILFTSSNHSSYSKLYDALTN 152
           IE G+   +  NLL   ++ + +  PFG   F+ L TS +HS Y+++Y+A+ N
Sbjct: 106 IEFGKFLINRNNLLGGEISFILAGLPFGQQGFMAL-TSGHHSMYTQVYEAILN 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,292,293
Number of Sequences: 1657284
Number of extensions: 7593282
Number of successful extensions: 16262
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16251
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)