Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0353
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.011
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 539 SNVNRILHVERIPYFFCIFGIYTIFLYFCFCSAFF 643
           S V +  ++ RI YF+C+   + + L F  CS +F
Sbjct: 45  SLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYF 79



 Score = 29.1 bits (62), Expect = 0.034
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 572 IPYFFCIFGIYTIFLYFCFCSAFF 643
           I +FFC F I+T+ L FC    FF
Sbjct: 166 IYHFFCAFIIFTMHLLFCCAFIFF 189



 Score = 27.9 bits (59), Expect = 0.079
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 572 IPYFFCIFGIYTIFLYFCFCSAFF 643
           I YF+C F I+T+ L F  C   F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 578 YFFCIFGIYTIFLYFCFCSAFFV 646
           YF+  F I+T+ L F  C  +FV
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFV 137



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 581 FFCIFGIYTIFLYFCFCSAFF 643
           F C F I+T+ L F  C  +F
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYF 288



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 554 ILHVERIPYFFCIFGIYTIFLYFCFC 631
           +L +  I YF+  F I+TI L F +C
Sbjct: 206 LLFLPCIYYFYSAFIIFTIHLLF-YC 230



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 572 IPYFFCIFGIYTIFLYFCFCSAFFV 646
           I YF+C   I  + +Y+ FC AF +
Sbjct: 285 IYYFYCAL-IILLCIYY-FCRAFII 307


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -3

Query: 350 STFVLKPNKNVPQK-NRNGGNSFPRSK 273
           +T +++ N+NVPQK   NG   FP S+
Sbjct: 735 ATSLVESNRNVPQKCIFNGQAYFPGSR 761


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 256 LTLYSITPFGVSVFVILFT 200
           +T YSI+ F V + V++FT
Sbjct: 204 VTWYSISVFMVPLVVLIFT 222


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 117 MLCINLVHHFIELVKASYNLE*EL 188
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 117 MLCINLVHHFIELVKASYNLE*EL 188
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 117 MLCINLVHHFIELVKASYNLE*EL 188
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 571 LLCDSVAHTAGELLGAVYSLDLEL 594


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 572 YVPREVYDSRL 540
           YVPREVY+  +
Sbjct: 355 YVPREVYNKEI 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,045
Number of Sequences: 336
Number of extensions: 2260
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)