Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0353
         (664 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g01190.1 68417.m00157 phosphatidylinositol-4-phosphate 5-kina...    28   6.4  
At5g49950.1 68418.m06185 embryogenesis-associated protein-relate...    27   8.4  
At1g28580.2 68414.m03519 GDSL-motif lipase, putative similar to ...    27   8.4  
At1g28580.1 68414.m03520 GDSL-motif lipase, putative similar to ...    27   8.4  

>At4g01190.1 68417.m00157 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam profile
           PF01504: Phosphatidylinositol-4-phosphate 5-Kinase
          Length = 401

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 292 IHFHVQNLLTNVLTLYSITPF-GVSVFVILFTSSNHSS--YSKLYD 164
           I++H  +L T +   +S+ P  GV  +  + ++  HS+   +KLYD
Sbjct: 107 INYHRSSLFTRIFGAHSVKPLGGVKTYFAVMSNMLHSTIFVNKLYD 152


>At5g49950.1 68418.m06185 embryogenesis-associated protein-related
           contains weak similarity to Embryogenesis-associated
           protein EMB8 (Swiss-Prot:Q40863) [Picea glauca]
          Length = 537

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 211 ILFTSSNHSSYSKLYDALTNSIKWCTKLIH 122
           I+  ++ H  +   Y+ LT S  W T+++H
Sbjct: 374 IVLATTTHGGHLAYYEGLTASSMWWTRVVH 403


>At1g28580.2 68414.m03519 GDSL-motif lipase, putative similar to
           lipase [Arabidopsis thaliana] GI:1145627; contains
           InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L
           family
          Length = 309

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 235 PFGVSVFVILFTSSNHSSYSKLYDALTNSIKWCTK 131
           P G SV   L+ +S+ +S  + YD LT  +KW  K
Sbjct: 148 PVGCSV---LYLTSHQTSNMEEYDPLTGCLKWLNK 179


>At1g28580.1 68414.m03520 GDSL-motif lipase, putative similar to
           lipase [Arabidopsis thaliana] GI:1145627; contains
           InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L
           family
          Length = 390

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 235 PFGVSVFVILFTSSNHSSYSKLYDALTNSIKWCTK 131
           P G SV   L+ +S+ +S  + YD LT  +KW  K
Sbjct: 229 PVGCSV---LYLTSHQTSNMEEYDPLTGCLKWLNK 260


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,719,343
Number of Sequences: 28952
Number of extensions: 170777
Number of successful extensions: 366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)