Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0352
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    25   3.0  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   4.0  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   9.2  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    23   9.2  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    23   9.2  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    23   9.2  

>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -1

Query: 362 HPSHRKVSNSVIKLLIIKNQKST 294
           HPSH++V++ +I+L + ++   T
Sbjct: 86  HPSHQRVASQLIELFLEQSNPDT 108


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +3

Query: 324 FYY*IRNFSVAWVFFVIITD*RKSVLQFITIDRMLSAKKMF 446
           ++Y    F+  WV F +I     +VL  + ++R   ++  F
Sbjct: 223 YFYETEQFAFLWVLFTVIVLGNSAVLVTLMLNRTRKSRMNF 263


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -1

Query: 161 VLETDIRS-YIRLNIHIILIALVGRRAYGPPDGEWLPSPMDFSNARDKAK 15
           V+ TD+++ + R+N H +L+A + R  +     EWL S +  +N R + K
Sbjct: 67  VIYTDLKAAFDRVN-HRLLLAKLARLGFSASLVEWLESYL--TNRRYRVK 113


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 161 VLETDIRSYIRLNIHIILIALVGRRAYGPPDGEWLPS 51
           V+ TD+++      H+IL+A + R     P   WL S
Sbjct: 67  VIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS 103


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 161 VLETDIRSYIRLNIHIILIALVGRRAYGPPDGEWLPS 51
           V+ TD+++      H+IL+A + R     P   WL S
Sbjct: 67  VIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS 103


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 161 VLETDIRSYIRLNIHIILIALVGRRAYGPPDGEWLPS 51
           V+ TD+++      H+IL+A + R     P   WL S
Sbjct: 67  VIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,946
Number of Sequences: 2352
Number of extensions: 13485
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)