Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0351
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.3  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.0  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 212  ALQDYFNVLIIILCFFYFLCSYNVFFFYIPYYVDLYN 322
            A+ DY N++ I  C F   C   +F     Y+++ +N
Sbjct: 1653 AVLDYLNMIFI--CIFSSECLMKIFALRYHYFIEPWN 1687


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 297 YLIMSICIIPLCLLFIVDVAIIVSVCFMIR-ISHDVKETGRK 419
           Y++    +IPL +L I+ +  ++S+   +R  + D+K   RK
Sbjct: 658 YIVSPAAVIPLLVLLILIIYYLISLTGSLREANQDLKLQLRK 699


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +2

Query: 173 LVYIFFSTEHANVALQDYFNVLIIILCFFYFLCSYNVFFFYIPYYVDLYNS 325
           L Y  +    +N + Q+Y+N++ ++L   YFL   ++ + Y    ++L+ S
Sbjct: 227 LCYAEWPDGPSNHSRQEYYNIVFMLLT--YFLPIGSMTYTYARVGLELWGS 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,087
Number of Sequences: 2352
Number of extensions: 11655
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)