Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0351
         (701 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42580.1 68418.m05184 cytochrome P450 family protein similar ...    31   0.74 
At2g38500.1 68415.m04730 expressed protein                             29   2.3  

>At5g42580.1 68418.m05184 cytochrome P450 family protein similar to
           Cytochrome P450 93A1 (SP:Q42798)  {Glycine max}; similar
           to flavone synthase II (GI:5081817) [Gerbera hybrida].
          Length = 499

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 203 ANVALQDYFNVLI-IILCFFYFLCSYNVFFFYIPYYVDLYNSPLSLIYCRRCHN 361
           A + + D+ N+ I I+LC F FLC     FF  P   DL  SP SL      H+
Sbjct: 2   AELIIVDFQNISIFILLCLFSFLC--YALFFKKPKGFDLPPSPPSLPIIGHLHH 53


>At2g38500.1 68415.m04730 expressed protein
          Length = 356

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 169 LPCIHIFFY*TCKCCTAGLFQCSNNYFVLFLFSMFIQCFF 288
           L C+ +F   T    T+  F  ++  F  FL   F QCF+
Sbjct: 309 LKCMSLFLSHTSIATTSKTFSLTHQIFTAFLLLFFFQCFW 348


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,052,984
Number of Sequences: 28952
Number of extensions: 225086
Number of successful extensions: 595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)