Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0350
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118; ... 103 4e-21
UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18; c... 101 2e-20
UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78; E... 95 1e-18
UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24; c... 95 2e-18
UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659; ... 94 3e-18
UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13; c... 91 2e-17
UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1; Pr... 90 4e-17
UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18; P... 87 5e-16
UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2; Va... 85 2e-15
UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1; Ca... 82 1e-14
UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 82 1e-14
UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1; Ar... 81 3e-14
UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6; Co... 79 8e-14
UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551; ... 76 9e-13
UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4; Ne... 75 1e-12
UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3; Al... 73 7e-12
UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1; Pe... 73 7e-12
UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3; Fu... 73 7e-12
UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1; Phae... 71 3e-11
UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5; Al... 71 4e-11
UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3; As... 70 5e-11
UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;... 70 6e-11
UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xe... 69 1e-10
UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10; F... 69 1e-10
UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14; A... 69 1e-10
UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7; Ch... 68 3e-10
UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6; Ar... 67 4e-10
UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18; A... 66 6e-10
UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1; Xi... 66 8e-10
UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1; Ha... 64 3e-09
UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 63 7e-09
UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;... 62 2e-08
UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=13... 61 3e-08
UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5; Eu... 60 4e-08
UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3; Me... 59 1e-07
UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1; Scen... 58 2e-07
UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11... 58 3e-07
UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1; Ac... 57 4e-07
UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1; Rh... 56 6e-07
UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14... 56 1e-06
UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;... 56 1e-06
UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1; Lo... 54 2e-06
UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9; Em... 53 6e-06
UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3; Bo... 53 8e-06
UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1; Di... 50 4e-05
UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1; Gl... 50 4e-05
UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12; M... 50 4e-05
UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6; Me... 50 5e-05
UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1; Va... 49 9e-05
UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2; Cr... 49 9e-05
UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1; Tr... 46 7e-04
UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;... 46 0.001
UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11... 45 0.002
UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1; Mi... 45 0.002
UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9; Euka... 45 0.002
UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1; St... 45 0.002
UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;... 44 0.003
UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1; ... 44 0.004
UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1; Hi... 42 0.019
UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia gloss... 41 0.025
UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132; ... 40 0.043
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 39 0.13
UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit I... 38 0.18
UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3; Em... 36 0.71
UniRef50_Q970H6 Cluster: Putative uncharacterized protein ST1619... 34 3.8
UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n... 34 3.8
UniRef50_Q22UV0 Cluster: Hypothetical repeat containing protein;... 33 6.6
UniRef50_Q0Z880 Cluster: NADH dehydrogenase subunit 4L; n=1; Aga... 33 8.7
>UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118;
Bilateria|Rep: Cytochrome c oxidase subunit 3 - Locusta
migratoria (Migratory locust)
Length = 263
Score = 103 bits (247), Expect = 4e-21
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P IE+G PP I PFNP QIPLLNT IL+ SGVT+T AHHS++E N SQ Q LF
Sbjct: 108 LAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAHHSIMECNHSQALQGLFF 167
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T++LGFYF + + + GSTFF+ATG
Sbjct: 168 TVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVATG 204
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/75 (42%), Positives = 38/75 (50%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
FH+VDY P P TGAIG + L +G Q RD+ REGT+
Sbjct: 10 FHMVDYSPWPLTGAIGAMILTSGMTKWFHTFNMNLLMIGMTVIVLTMIQWWRDVVREGTF 69
Query: 191 QGKHTILVNKGLR*G 235
QG HT LV+KGLR G
Sbjct: 70 QGLHTKLVSKGLRWG 84
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = +3
Query: 474 IIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIR 653
+ F + F +LQ YEY EA FTIAD +YG FF + C IR
Sbjct: 165 LFFTVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVAT-GFHGLHVIIGTTFLLTCLIR 223
Query: 654 HLNNHFSKN 680
H+ N FS N
Sbjct: 224 HMMNQFSSN 232
>UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Anopheles gambiae (African malaria mosquito)
Length = 262
Score = 101 bits (242), Expect = 2e-20
Identities = 52/97 (53%), Positives = 62/97 (63%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP IE+G PP I FNPFQIPLLNT IL+ SGVTVT AHH+L+E N SQ Q LF
Sbjct: 107 LSPTIELGMTWPPVGIAAFNPFQIPLLNTAILLASGVTVTWAHHALMEGNHSQATQGLFF 166
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI+LG YF + + + GSTF++ATG
Sbjct: 167 TIVLGVYFTILQAYEYIEAPFTIADAVYGSTFYMATG 203
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/75 (45%), Positives = 38/75 (50%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
FHLVDY P P TGAIG +T ++G YQ RDISREGT+
Sbjct: 9 FHLVDYSPWPLTGAIGAMTTVSGLVQWFHQYTMTLFILGNVITILTMYQWWRDISREGTF 68
Query: 191 QGKHTILVNKGLR*G 235
QG HT V GLR G
Sbjct: 69 QGLHTFPVTIGLRWG 83
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +3
Query: 474 IIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIR 653
+ F + + F ILQAYEYIEA FTIAD +YG F+ + IC++R
Sbjct: 164 LFFTIVLGVYFTILQAYEYIEAPFTIADAVYGSTFYMAT-GFHGLHVLIGTTFLLICFLR 222
Query: 654 HLNNHFSKN 680
H+N HFSKN
Sbjct: 223 HINYHFSKN 231
>UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78;
Eumetazoa|Rep: Cytochrome c oxidase subunit 3 - Gallus
gallus (Chicken)
Length = 261
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/97 (49%), Positives = 60/97 (61%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P E+G PP+ + P NP ++PLLNT IL+ SGVTVT AHHS+ E N Q L L
Sbjct: 106 LAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTL 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TILLGFYF + M + + GSTFF+ATG
Sbjct: 166 TILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATG 202
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/75 (33%), Positives = 30/75 (40%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
+H+VD P P GA L +G Q RD+ RE T+
Sbjct: 8 YHMVDPSPWPIFGAAAALLTTSGLIMWFHYSSTTLLTMGLLSMLLVMLQWWRDVVRESTF 67
Query: 191 QGKHTILVNKGLR*G 235
QG HT V KGLR G
Sbjct: 68 QGHHTPTVQKGLRYG 82
>UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Rhipicephalus sanguineus (Brown dog tick)
Length = 257
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/97 (47%), Positives = 61/97 (62%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSPNIEIG PP I PFNPF+IPLLN+ ILI SG+TVT +HH+++ N+ L +
Sbjct: 104 LSPNIEIGSQWPPKGIYPFNPFEIPLLNSTILISSGITVTWSHHAIMNKNYISALNSLLI 163
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TILLG F ++ + ++ GSTFF+ TG
Sbjct: 164 TILLGVAFTMFQGFEYFQAQFKISDGIFGSTFFMTTG 200
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
FHLV+ P P T +I L+L G ++Q RDISREG++
Sbjct: 6 FHLVEKSPWPITSSISALSLTLGFVSYFQNLSMYLILLAVLMITISSFQWWRDISREGSF 65
Query: 191 QGKHTILVNKGLR*G 235
QG HT V GL+ G
Sbjct: 66 QGFHTHWVLNGLKMG 80
>UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Homo sapiens (Human)
Length = 261
Score = 94.3 bits (224), Expect = 3e-18
Identities = 46/97 (47%), Positives = 63/97 (64%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P ++G PP+ ITP NP ++PLLNT +L+ SGV++T AHHSL+ENN +Q Q L +
Sbjct: 106 LAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLI 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TILLG YF + + + GSTFF+ATG
Sbjct: 166 TILLGLYFTLLQASEYFESPFTISDGIYGSTFFVATG 202
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/75 (36%), Positives = 34/75 (45%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
+H+V P P TGA+ L + +G YQ RD++RE TY
Sbjct: 8 YHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLMLGLLTNTLTMYQWWRDVTRESTY 67
Query: 191 QGKHTILVNKGLR*G 235
QG HT V KGLR G
Sbjct: 68 QGHHTPPVQKGLRYG 82
>UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Dugong dugon (Dugong)
Length = 261
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/97 (46%), Positives = 60/97 (61%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P E+G PP+ I P +P ++PLLNT +L+ SGVT+T AHHSL+E N Q Q LF+
Sbjct: 106 LAPTPELGGCWPPTGIHPLDPMEVPLLNTSVLLASGVTITWAHHSLMEGNRKQMLQALFI 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI LG YF + + + GSTFF+ATG
Sbjct: 166 TISLGIYFTLLQASEYHEASFSISDGIYGSTFFMATG 202
Score = 49.2 bits (112), Expect = 9e-05
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
+H+V+ P P TGA+ L + +G YQ RD+ REGT+
Sbjct: 8 YHMVNPSPWPLTGALSALLMTSGLVMWFHYHSTILVLLGLLTNILTMYQWWRDVVREGTF 67
Query: 191 QGKHTILVNKGLR*G 235
QG HT V KGLR G
Sbjct: 68 QGHHTPTVQKGLRYG 82
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 498 ILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIRHLNNHFSK 677
I F +LQA EY EASF+I+D IYG FF + +C++R L HF+
Sbjct: 171 IYFTLLQASEYHEASFSISDGIYGSTFFMAT-GFHGLHVIIGSTFLAVCFLRQLKFHFTS 229
Query: 678 N 680
N
Sbjct: 230 N 230
>UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Primeuchroeus sp. M48|Rep: Cytochrome c oxidase subunit
3 - Primeuchroeus sp. M48
Length = 227
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/97 (45%), Positives = 59/97 (60%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP +EIG I PP ITPFNPF +PLLNTIIL+ SG+T+T HHS++ N ++ + +
Sbjct: 105 LSPAVEIGGIWPPKGITPFNPFHVPLLNTIILLSSGLTITWCHHSIMNNMKNEAINSMKM 164
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI LG F + + + GSTFF+ TG
Sbjct: 165 TITLGILFSILQGYEYIEAPFTIADSIYGSTFFLTTG 201
Score = 40.3 bits (90), Expect = 0.043
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
FHLV+ P P AI V+ ++ G Q RD+ RE T
Sbjct: 7 FHLVNESPWPIXSAISVMIMLLGSIKWFSMNNPNMLMLGMITTILIMIQWWRDVIRESTL 66
Query: 191 QGKHTILVNKGLR*G 235
QG HT+ V+ GLR G
Sbjct: 67 QGLHTMKVSMGLRWG 81
>UniRef50_P34843 Cluster: Cytochrome c oxidase subunit 3; n=18;
Protostomia|Rep: Cytochrome c oxidase subunit 3 - Apis
mellifera ligustica (Common honeybee)
Length = 259
Score = 86.6 bits (205), Expect = 5e-16
Identities = 46/97 (47%), Positives = 56/97 (57%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
+SPNIEI PP I FNP +IPLLN+ IL+ SG TVT +H+ LI NN +K L L
Sbjct: 105 ISPNIEINMTWPPKNIKFFNPMEIPLLNSFILVSSGFTVTLSHYYLIINNLKLSKSYLLL 164
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TILLG YF + + GS FF+ATG
Sbjct: 165 TILLGIYFTILQTIEYSNSFFCFNDSIYGSIFFMATG 201
>UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2;
Varroa destructor|Rep: Cytochrome c oxidase subunit 3 -
Varroa destructor (honeybee mite)
Length = 263
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/97 (42%), Positives = 60/97 (61%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP+IEIG + PP I FNP++IPLLNT++L+ SG T+T +H+S++ N L L
Sbjct: 104 LSPSIEIGMMWPPKGIIFFNPYEIPLLNTMVLLMSGFTITWSHYSILNNKKLMALVSLLL 163
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T+ LG YF ++M + L + GS F++ TG
Sbjct: 164 TVSLGIYFSLLQYMEYKQALFTINDGICGSVFYMLTG 200
>UniRef50_Q6ED55 Cluster: Cytochrome c oxidase subunit 3; n=1;
Candida stellata|Rep: Cytochrome c oxidase subunit 3 -
Candida stellata (Yeast)
Length = 271
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/98 (43%), Positives = 57/98 (58%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P++EIG I PP I P +PL NT+IL+ SG T+T +HH+LI N + LFL
Sbjct: 116 LTPSVEIGEIWPPISIIPIQATDLPLFNTLILLISGATITYSHHALIARNRFNSIFGLFL 175
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
TILLGF FI ++ L GS FF+ TG+
Sbjct: 176 TILLGFLFIICQYFEYYYCSYTLADSVYGSVFFMLTGL 213
>UniRef50_Q4W8D5 Cluster: Cytochrome c oxidase subunit 3; n=14;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 -
Leptotrombidium pallidum
Length = 259
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/96 (43%), Positives = 56/96 (58%)
Frame = +1
Query: 307 SPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLT 486
SPN+EIG I PP ++ PF +IPLLNTIIL+ SG T+T AHH L++ + + LT
Sbjct: 105 SPNVEIGSIWPPQKVVPFPVEEIPLLNTIILLSSGGTLTAAHHFLLKGEKKHSSSLMKLT 164
Query: 487 ILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
ILLG F + + + GS FF+ATG
Sbjct: 165 ILLGMLFTLLQGYEYLEAKFSMSDSSFGSAFFLATG 200
>UniRef50_Q6SL39 Cluster: Cytochrome c oxidase subunit 3; n=1;
Armillifer armillatus|Rep: Cytochrome c oxidase subunit
3 - Armillifer armillatus
Length = 260
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/97 (45%), Positives = 57/97 (58%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSPN +G PP I F+P +IPLLNT+IL+ SG +VT +HHSL+ N+SQ L L
Sbjct: 105 LSPNTFLGLHWPPLGIKSFSPTEIPLLNTLILLSSGASVTWSHHSLLNKNYSQFLLSLSL 164
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI+LG YF + + L S FF+ATG
Sbjct: 165 TIILGTYFTSLQLLEYNLAPFTLSESIFSSMFFLATG 201
>UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6;
Coelomata|Rep: Cytochrome c oxidase subunit 3 -
Acrochordus granulatus (Rasp-skinned water snake)
Length = 261
Score = 79.4 bits (187), Expect = 8e-14
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L P E+G PP+ ITP NP ++PLLNT +L+ SG T+T +HH++ N + L +
Sbjct: 106 LVPTPELGAEWPPTGITPLNPMEVPLLNTAVLLSSGATITWSHHTMTNGNKKEATYALMI 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI+LG YF + + GS FF+ATG
Sbjct: 166 TIMLGIYFTTLQLSEYKDTPFTISDSVYGSLFFVATG 202
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/76 (35%), Positives = 34/76 (44%)
Frame = +2
Query: 8 RFHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGT 187
++HLVD P P TGA+G L L +G Q RD+ RE T
Sbjct: 7 QYHLVDPSPWPLTGAMGSLLLASGLALWFHTGTLMILKLGLLTLTLTMVQWWRDVIREST 66
Query: 188 YQGKHTILVNKGLR*G 235
+QG HT V K +R G
Sbjct: 67 FQGHHTKGVQKNMRYG 82
>UniRef50_P92514 Cluster: Cytochrome c oxidase subunit 3; n=551;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 265
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = +1
Query: 220 RITMRNNFIYYL--EIXXXXXXXXXXXXXXLSPNIEIGRI*PPSRITPFNPFQIPLLNTI 393
++ +R FI ++ E+ L+P +EIG I PP I +P++IP LNT+
Sbjct: 79 QLGLRYGFILFIVSEVMFFFAFFWAFFHSSLAPAVEIGGIWPPKGIEVLDPWEIPFLNTL 138
Query: 394 ILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLLLQLLIEFMGS 573
IL+ SG VT AHH+++ + L T+LL F ++ M + + GS
Sbjct: 139 ILLSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSIYGS 198
Query: 574 TFFIATG 594
TFF+ATG
Sbjct: 199 TFFLATG 205
>UniRef50_Q699N4 Cluster: Cytochrome c oxidase subunit 3; n=4;
Neoptera|Rep: Cytochrome c oxidase subunit 3 -
Schizaphis graminum (Aphid)
Length = 261
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P+IE+G PP I FNP IPLLNTIIL+ S T+T AH L+ N+ +T + L
Sbjct: 106 LAPSIELGLNWPPKNIMFFNPLLIPLLNTIILLTSSFTITLAHLYLLNNSKKKTIIFMNL 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI+L YF+ + + + GS+F++ATG
Sbjct: 166 TIILSIYFLMLQMLEYKQATFTFSDSIFGSSFYMATG 202
>UniRef50_Q674Q1 Cluster: Cytochrome c oxidase subunit 3; n=3;
Aleyrodinae|Rep: Cytochrome c oxidase subunit 3 -
Bemisia tabaci (Sweetpotato whitefly)
Length = 262
Score = 72.9 bits (171), Expect = 7e-12
Identities = 39/97 (40%), Positives = 53/97 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP++ G I PP I + IPLLNT+IL+ SG +T AH+ L NNF +K L +
Sbjct: 107 LSPDMTTGSIWPPYLIIQMSFMDIPLLNTLILLMSGFLITWAHYDLTMNNFKNSKTSLLM 166
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
+ILLG YF+ + G++FFI TG
Sbjct: 167 SILLGTYFLMIQGYEYLNSNFSFNDSVFGNSFFILTG 203
>UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Pediculus humanus corporis|Rep: Cytochrome c oxidase
subunit 3 - Pediculus humanus corporis (human body
louse)
Length = 273
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/97 (34%), Positives = 57/97 (58%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP++ +G + PP ++P +PLLN+I+L+ SGV++T AH+ L+ N S + L +
Sbjct: 118 LSPDVSLGLLYPPVGVSPVGVLGVPLLNSILLLSSGVSITWAHNELLSKNISSSLIGLLI 177
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T++LG F+ ++ + + GS FF+ TG
Sbjct: 178 TLILGLVFLMFQAVEYKTSSFTMADSSFGSVFFLMTG 214
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 164 RDISREGTYQGKHTILVNKGLR*G 235
RD++RE T+QGKHT+ V GLR G
Sbjct: 71 RDVTREATFQGKHTMEVIAGLRLG 94
>UniRef50_Q3T4A3 Cluster: Cytochrome c oxidase subunit 3; n=3;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Smittium culisetae (Gut fungus)
Length = 260
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIEN-NFSQTKQRLF 480
L P IE+G + PP I NPF IPLLNT++L+ SG TVT AH+S+I+N N +T LF
Sbjct: 104 LVPEIELGGLWPPLGIEAVNPFGIPLLNTLLLLSSGATVTWAHYSMIKNTNKKETIISLF 163
Query: 481 LTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
LTIL F + + G TF+ TG+
Sbjct: 164 LTILYATIFTLLQLFEYYYAPFSFVDGVYGCTFYAGTGL 202
>UniRef50_A7UG17 Cluster: Cytochrome oxidase subunit 3; n=1;
Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase
subunit 3 - Phaeosphaeria nodorum SN15
Length = 275
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/97 (38%), Positives = 53/97 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP +E+G + PP I +PF++PL+NT+IL+ SG TVT HH LI N S+T L
Sbjct: 120 LSPAVELGAMWPPMGIEAIDPFELPLINTVILLSSGFTVTYGHHFLINGNRSKTLYGLLY 179
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T++L F + + + GS F+ TG
Sbjct: 180 TVILATIFTGLQGVEYSVSSFTISDGAFGSCFYFGTG 216
>UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5;
Aleyrodidae|Rep: Cytochrome c oxidase subunit 3 -
Aleurochiton aceris
Length = 261
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/97 (38%), Positives = 53/97 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP+I +G PP P + IPLLNT+IL+ SG +T AH+SL+ NN+ K +
Sbjct: 106 LSPDISLGSNWPPLGTQPVSYLNIPLLNTLILLSSGFFITWAHYSLMNNNYYMMKFNYTV 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
+IL+G YF + ++ S+FFI TG
Sbjct: 166 SILMGVYFFIIQMYEYFEISFDFSDSSFSSSFFILTG 202
>UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 268
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/97 (37%), Positives = 53/97 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
++P IE+G + PP I P ++PLLNTI+L+ SG T+T +HH+L+ N T L L
Sbjct: 113 MAPTIELGGVWPPVGIEAIGPSELPLLNTILLLCSGATLTWSHHALLGGNRFNTLLGLIL 172
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI L F+ ++M + GS F+ TG
Sbjct: 173 TIALAVTFMICQYMEYSNAPFTISDGIFGSVFYFGTG 209
>UniRef50_Q5P2E8 Cluster: Cytochrome c oxidase, subunit III; n=2;
Azoarcus|Rep: Cytochrome c oxidase, subunit III -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 283
Score = 69.7 bits (163), Expect = 6e-11
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +1
Query: 352 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFI---FYKH 522
TP + IP LNT+IL+ SGVT+T AH+ L+++N SQ K L LTILLG F+ Y++
Sbjct: 142 TPMGAWGIPALNTLILLSSGVTLTWAHYGLLKDNRSQLKIGLLLTILLGVTFLGFQIYEY 201
Query: 523 MNI*K-LLLQLLIEFMGSTFFIATG 594
++ + L LQL GSTFF+ TG
Sbjct: 202 VHAYRELNLQLDTGIYGSTFFMLTG 226
>UniRef50_Q0QJ94 Cluster: Cytochrome c oxidase subunit 3; n=1; Xenos
vesparum|Rep: Cytochrome c oxidase subunit 3 - Xenos
vesparum
Length = 251
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
PP + NP+ IPLLNT+IL S +T+T +HH LI N+ K F+T++LG FI
Sbjct: 112 PPKFLLMINPYHIPLLNTLILFSSSITITWSHHCLINKNYKIMKISSFITLMLGITFITL 171
Query: 517 KHMNI*KLLLQLLIEFMGSTFFIATG 594
+ + + GS+F++ TG
Sbjct: 172 QIYEFFTMKFNMNDSIYGSSFYLTTG 197
>UniRef50_Q85MB7 Cluster: Cytochrome c oxidase subunit 3; n=10;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 3
- Monoblepharella sp. JEL15
Length = 292
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP+I +G + PP I +P+ IPLL +IIL+ SG T T AH++LI N +F
Sbjct: 106 LSPDIVLGGVWPPIGIVSVDPWSIPLLGSIILLSSGATCTVAHNALINGNKDLAVATMFA 165
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
T++LGF F+ + + G+ F++ TG+
Sbjct: 166 TVVLGFLFVGLQATEYYVSEFSIADSIFGTVFYMTTGL 203
>UniRef50_P14575 Cluster: Cytochrome c oxidase subunit 3; n=14;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Schizosaccharomyces pombe (Fission yeast)
Length = 269
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITP--FNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRL 477
LSP E+G + PP I +P ++PLLNT+IL+ SG ++T AH+SLI N + L
Sbjct: 112 LSPTFELGAVWPPVGIADKTIDPLEVPLLNTVILLTSGASLTYAHYSLIARNRENALKGL 171
Query: 478 FLTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
++TI L F F+ + + G++F+ ATG+
Sbjct: 172 YMTIALSFLFLGGQAYEYWNAPFTISDSVYGASFYFATGL 211
>UniRef50_P24891 Cluster: Cytochrome c oxidase subunit 3; n=7;
Chromadorea|Rep: Cytochrome c oxidase subunit 3 -
Caenorhabditis elegans
Length = 255
Score = 67.7 bits (158), Expect = 3e-10
Identities = 40/97 (41%), Positives = 52/97 (53%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L P E+G P + NPF +PLLNTIIL+ SGVTVT AHHSL+ N + L
Sbjct: 102 LVPVHELGETWSPFGMHLVNPFGVPLLNTIILLSSGVTVTWAHHSLLSN--KSCTNSMIL 159
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T LL YF + M + + GS F+++TG
Sbjct: 160 TCLLAAYFTGIQLMEYMEASFSIADGVFGSIFYLSTG 196
>UniRef50_O99810 Cluster: Cytochrome c oxidase subunit 3; n=6;
Arthropoda|Rep: Cytochrome c oxidase subunit 3 - Ixodes
hexagonus (Hedgehog tick)
Length = 261
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
P + P F+IPLL T ILI SG++++ +H S+I NNF + L +TI+LG F F
Sbjct: 117 PLKMLLPLILFEIPLLKTTILISSGISISWSHQSIINNNFKEAFNSLLITIMLGVTFTFL 176
Query: 517 KHMNI*KLLLQLLIEFMGSTFFIATG 594
+ + + GSTFF+ TG
Sbjct: 177 QGWEYKQSQFSMSDSIFGSTFFMTTG 202
>UniRef50_P00420 Cluster: Cytochrome c oxidase subunit 3; n=18;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 269
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/98 (34%), Positives = 53/98 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
+SP++ +G PP I P ++PLLNTIIL+ SG TVT +HH+LI N ++ L +
Sbjct: 114 MSPDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLI 173
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
T L F+ +++ + GS F+ TG+
Sbjct: 174 TFWLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGL 211
>UniRef50_Q6TY89 Cluster: Cytochrome c oxidase subunit 3; n=1;
Xiphinema americanum|Rep: Cytochrome c oxidase subunit 3
- Xiphinema americanum
Length = 249
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +1
Query: 364 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLL 543
PFQ+PLLNTI+L+ SGVT T +HH ++ S LF ++LLG YF+ + M L
Sbjct: 116 PFQVPLLNTIVLLMSGVTATLSHHEVLAGEKSMW---LFYSLLLGIYFLMLQGMEYYSSL 172
Query: 544 LQLLIEFMGSTFFIATG 594
+ GS FF+ TG
Sbjct: 173 FSISSSVFGSLFFLGTG 189
>UniRef50_Q2LMM5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hanseniaspora uvarum|Rep: Cytochrome c oxidase subunit 3
- Hanseniaspora uvarum (Yeast)
Length = 262
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/98 (32%), Positives = 52/98 (53%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
++P IE+G P I ++PLLNTI+L+ SG TVT +HH I ++ + +F+
Sbjct: 108 MNPTIELGLQWAPLDIVKVEAMELPLLNTILLLSSGATVTLSHHKWINGDYKNSTIAMFI 167
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
T LL F+ ++ + + GSTF+ TG+
Sbjct: 168 TTLLVVVFVVFQVVEYITAQFTITDGVFGSTFYAGTGL 205
>UniRef50_Q2HJM2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Gliricola porcelli|Rep: Cytochrome c oxidase subunit 3 -
Gliricola porcelli
Length = 234
Score = 62.9 bits (146), Expect = 7e-09
Identities = 37/95 (38%), Positives = 52/95 (54%)
Frame = +1
Query: 310 PNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTI 489
P+I IG + P I+P +PLL T+IL+ SGVTVT H ++EN + + LF+TI
Sbjct: 110 PSIFIGALWPSWGISPIENMNVPLLGTLILLSSGVTVTICHKQMLENVYE--PKFLFITI 167
Query: 490 LLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
+LG F + M + GS FF+ATG
Sbjct: 168 ILGVMFSILQMMEYIENSFCFNDSVYGSFFFLATG 202
>UniRef50_A3VNW6 Cluster: Cytochrome c oxidase, subunit III; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
oxidase, subunit III - Parvularcula bermudensis HTCC2503
Length = 319
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
P + P +P+ +P +NT+IL+ SG TVT AHH++ + K L +T+ LG F F+
Sbjct: 165 PGPGVEPLSPWGLPFVNTVILLLSGTTVTWAHHAIQVGDKEGFKWGLIVTVALGVIFSFF 224
Query: 517 KHMNI*KLLLQLLIEF-----MGSTFFIATG 594
+ + ++L Q + F GS+FF+ATG
Sbjct: 225 QGVEYYEVLSQDMFSFNGGSIYGSSFFMATG 255
>UniRef50_Q9I724 Cluster: Cytochrome c oxidase, subunit III; n=130;
Proteobacteria|Rep: Cytochrome c oxidase, subunit III -
Pseudomonas aeruginosa
Length = 295
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIF- 513
PPS + P+++PL+NTI+L+ S TVT AHH+L +N K L LT+LLG F+
Sbjct: 151 PPSAV--IEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLIL 208
Query: 514 ----YKHMNI*KLLLQLLIEFMGSTFFIATG 594
Y H +L L L GSTFF+ TG
Sbjct: 209 QAEEYVHA-YNELGLTLGAGIYGSTFFMLTG 238
>UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5;
Eukaryota|Rep: Cytochrome c oxidase subunit 3 -
Acanthamoeba castellanii (Amoeba)
Length = 329
Score = 60.5 bits (140), Expect = 4e-08
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENN-----FSQTK 468
LSP++ +G + PP I NP +IPLLNT+IL+ SG+TVT +HH + + + FS +
Sbjct: 146 LSPSVVLGSVWPPLGINVLNPLKIPLLNTLILLLSGLTVTWSHHVIRDKSWQKFFFSNSN 205
Query: 469 QR----------------LFLTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
LFLT+ LG F ++ K + GSTF++ TG+
Sbjct: 206 NEEFKAPLLDNYVICAFALFLTVFLGLEFTVWQGYEYYKASFYIYDGVYGSTFYMTTGL 264
Score = 36.3 bits (80), Expect = 0.71
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 474 IIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIR 653
+ F+ + F + Q YEY +ASF I D +YG F+ + +C+ R
Sbjct: 224 LFLTVFLGLEFTVWQGYEYYKASFYIYDGVYGSTFYMTT-GLHGLHVIIGTLFLIVCFFR 282
Query: 654 HLNNHFSKN 680
++ HF N
Sbjct: 283 LIDLHFIYN 291
>UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Metazoa|Rep: Cytochrome c oxidase subunit 3 - Trichoplax
adhaerens
Length = 305
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI 444
L+P++E+G + PP I +PF +PLLNT IL+ SG TVT AHH++I
Sbjct: 106 LAPSVELGSVWPPLGIEALDPFAVPLLNTTILLSSGATVTWAHHAII 152
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 474 IIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIR 653
++ + I+F LQA+EY EASF I+D +YG FF +C+IR
Sbjct: 207 LLMTVLLGIIFTGLQAFEYKEASFAISDSVYGSTFFMLT-GTHGLHVLVGTTFLIVCFIR 265
Query: 654 HLNNHFSKNPSL 689
L+N F+ + L
Sbjct: 266 LLSNQFTNSHHL 277
Score = 41.1 bits (92), Expect = 0.025
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +2
Query: 11 FHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGTY 190
+HLVD P P GA G +G A RD+ REGT+
Sbjct: 8 YHLVDPSPWPFVGASGAFLFTSGAVILFHYNDYRLALTGLFLIIITASAWWRDVIREGTH 67
Query: 191 QGKHTILVNKGLR*G 235
QG HT +V +GL+ G
Sbjct: 68 QGHHTQVVVRGLKLG 82
>UniRef50_Q9MD26 Cluster: Cytochrome oxidase subunit 3; n=1;
Scenedesmus obliquus|Rep: Cytochrome oxidase subunit 3 -
Scenedesmus obliquus
Length = 311
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L P I++G PP I P + +P NTI+L+RS T A H++ NN S K L
Sbjct: 124 LMPTIQVGMSWPPVGIVPVHWTALPRTNTILLLRSYFTANAAKHAMDHNNKSLCKLHLRT 183
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
TI LG F++ +++ GS F++ TG
Sbjct: 184 TIGLGLLFVYCQYLEYTGAAFTFSDTVFGSAFYLTTG 220
>UniRef50_Q12E42 Cluster: Cytochrome c oxidase, subunit III; n=11;
Betaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 293
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 352 TPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFI---FYKH 522
T PF +P +NT +L+ SGVT+T AHH+L +N+ T ++ T+LLG F+ Y++
Sbjct: 152 TTMTPFWLPTINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEY 211
Query: 523 MN-I*KLLLQLLIEFMGSTFFIATG 594
+ +L L+L GSTF++ TG
Sbjct: 212 AHAYSELNLKLTSGVYGSTFYMLTG 236
>UniRef50_Q06SA4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Acanthocardia tuberculata|Rep: Cytochrome c oxidase
subunit 3 - Acanthocardia tuberculata (tuberculate
cockle)
Length = 278
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQR------LFLTILLG 498
PP I +P++IP +NT IL+ SG+TVT AH + N + TK LF+T++LG
Sbjct: 124 PPLGIKCLSPWKIPAVNTAILVGSGLTVTYAHRAAKSNKYKWTKTNPELTLGLFVTVVLG 183
Query: 499 FYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
F F+ + L + GS F+I TG
Sbjct: 184 FVFLGLQMYEYWWLTYSMNDGIFGSCFYIMTG 215
>UniRef50_Q950M9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Rhizophydium sp. 136|Rep: Cytochrome c oxidase subunit 3
- Rhizophydium sp. 136
Length = 275
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/97 (31%), Positives = 49/97 (50%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P IEI PP + N +PLLN+++L+ G T AHHS N + T L +
Sbjct: 121 LNPTIEIVTW-PPLGVNSINYLSLPLLNSVLLLSGGWIATWAHHSFFLGNKTNTLIGLII 179
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
++L F++ +++ + GS+FFI TG
Sbjct: 180 AVILTIIFVYVQYLEYSYSEFTIADSVYGSSFFILTG 216
>UniRef50_Q5LNY0 Cluster: Cytochrome c oxidase, subunit III; n=14;
Alphaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Silicibacter pomeroyi
Length = 271
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 361 NPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLFLTILLGFYFIFYKHMNI*K 537
+PF +PL+NT++L+ SG VT AHH+L+ NN + Q L + I LG F + +
Sbjct: 126 DPFHLPLINTLVLLLSGCAVTWAHHALVHNNDRKALIQGLSIGIFLGMIFTLLQAYEYAE 185
Query: 538 LLLQLLIEFMG----STFFIATG 594
LLL F G S FF+ATG
Sbjct: 186 LLLHEDWTFGGDQFYSNFFMATG 208
>UniRef50_Q2GD92 Cluster: Cytochrome c oxidase, subunit III; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Cytochrome c
oxidase, subunit III - Neorickettsia sennetsu (strain
Miyayama)
Length = 274
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
PP I NP+ +PLLNT++L+ SG ++T AHHS+++ + + L T++LG F
Sbjct: 124 PPEGIVAVNPWNLPLLNTMVLLLSGASMTWAHHSVLKGDNDGVVKGLLYTVVLGLIFTCL 183
Query: 517 KHMNI*KLLLQLLIE----FMGSTFFIATG 594
+ L E S F+IATG
Sbjct: 184 QGYEYYHSAFALAEEGYKAIYSSNFYIATG 213
>UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lottia digitalis|Rep: Cytochrome c oxidase subunit 3 -
Lottia digitalis (California fingered limpet)
Length = 280
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/98 (31%), Positives = 49/98 (50%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSP+ E+G PP I P N + +P LN+ +LI SG T+T A ++ E + + +
Sbjct: 108 LSPSFEVGMTWPPQGIVPPNAWGLPFLNSTLLINSGFTLTWASRAVKEGSKWSAAAGMVM 167
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
TI LG F+ + + GS F++ TG+
Sbjct: 168 TIALGVIFMAVQMKEWWDAPFDIRDSVYGSCFYMMTGL 205
Score = 32.7 bits (71), Expect = 8.7
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +2
Query: 5 TRFHLVDYRP*PXTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 184
T++H V P P + A +TG RD+ RE
Sbjct: 8 TKYHRVQPSPWPFSVAASTAIFLTGMLEWLWNYSLLGLIWGASAMAFGCCLWWRDVIREA 67
Query: 185 TYQGKHTILVNKGLR*G 235
T+QGKHT LV + ++ G
Sbjct: 68 TFQGKHTKLVQRFIKTG 84
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 474 IIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIR 653
++ + ++F +Q E+ +A F I D +YG F+ +C IR
Sbjct: 165 MVMTIALGVIFMAVQMKEWWDAPFDIRDSVYGSCFYMMT-GLHGLHVLGGLIFLFVCLIR 223
Query: 654 HLNNHFS 674
L NHFS
Sbjct: 224 LLRNHFS 230
>UniRef50_Q5K5G0 Cluster: Cytochrome c oxidase subunit 3; n=9;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Tulipa
sp. CQ-2001
Length = 239
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L+P +EIG I PP I +P++IP LNT IL SG VT AHH+++ + L
Sbjct: 110 LAPTVEIGGIWPPKGIGVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVA 169
Query: 484 TILL 495
T+ L
Sbjct: 170 TLSL 173
>UniRef50_Q9B8G8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Boopidae|Rep: Cytochrome c oxidase subunit 3 -
Heterodoxus macropus (wallaby louse)
Length = 263
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 349 ITPFNPFQIPLLNTIILIRSGVTVT*AHHSLI--ENNFSQTKQRLFLTILLGFYFIFYKH 522
I NP +PLL T+IL+ SGV+VT H+ L+ E N S K L +T++LG F +
Sbjct: 121 IMSLNPSTVPLLGTMILLSSGVSVTWCHNELMLSEGNLSSMKNSLLITVILGMVFAALQM 180
Query: 523 MNI*KLLLQLLIEFMGSTFFIATG 594
+ GS F++ TG
Sbjct: 181 WEYFMSTFTMSDGVYGSLFYMMTG 204
>UniRef50_Q9XKD9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit 3 -
Dicyema misakiense
Length = 255
Score = 50.4 bits (115), Expect = 4e-05
Identities = 35/119 (29%), Positives = 55/119 (46%)
Frame = +1
Query: 241 FIYYLEIXXXXXXXXXXXXXXLSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTV 420
F+ + E+ L P++ G P ++ F+PF +PLL T +LI S V V
Sbjct: 86 FVIFSEVMVFLGVLWSFSWSMLIPSVWTGFEWPLVGMSFFDPFSLPLLGTSLLISSAVFV 145
Query: 421 T*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
T +H S ++ T L +ILLG F+ + + + GS FF+ATG+
Sbjct: 146 TWSHGS---SSLKGTMISLLFSILLGSSFVCIQFIEYLSSSFTISSSSFGSCFFVATGL 201
>UniRef50_Q9T6M2 Cluster: Cytochrome c oxidase subunit 3; n=1;
Globodera pallida|Rep: Cytochrome c oxidase subunit 3 -
Globodera pallida
Length = 257
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/97 (29%), Positives = 49/97 (50%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L ++++G P + NPF +PLLN+++L+ S + +T +H+ + N FS L
Sbjct: 104 LVTSLDLGFWGVPLGVXKINPFGLPLLNSLLLLSSALILTNSHYFFLANGFSSL--TLLF 161
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
++ LG F+ + L GS FF+ATG
Sbjct: 162 SVFLGGVFLGVQGFEYQNSSFSLSDSSYGSIFFLATG 198
>UniRef50_A4UCW1 Cluster: Cytochrome c oxidase subunit 3; n=12;
Macoma|Rep: Cytochrome c oxidase subunit 3 - Macoma
balthica
Length = 198
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = +1
Query: 313 NIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTIL 492
N+ G + PP I P P+ PL NT IL+ SG VT AH ++ ++ + L L +L
Sbjct: 86 NLSSGCLWPPRPIIPVYPWGAPLFNTAILLTSGAAVTWAHRAVAIHDREEAMIPLGLCVL 145
Query: 493 LGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
G F+ ++ + GS F++ TG+
Sbjct: 146 AGVVFLRFQFGEYSTASFTIADSAYGSCFYMLTGL 180
>UniRef50_A2TN48 Cluster: Cytochrome c oxidase subunit 3; n=6;
Mermithidae|Rep: Cytochrome c oxidase subunit 3 -
Hexamermis agrotis
Length = 257
Score = 50.0 bits (114), Expect = 5e-05
Identities = 32/92 (34%), Positives = 47/92 (51%)
Frame = +1
Query: 319 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 498
E+G P IT N +PLLN+++L+ SGV++T H+L+ + L LTILLG
Sbjct: 109 ELGFQWPSKGITAVNYLSVPLLNSLLLLSSGVSLT-ISHNLMSLDLKSFNLYLGLTILLG 167
Query: 499 FYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
F + ++ L GS FF+ TG
Sbjct: 168 LLFSYCQYWEYLMLDFLWSDSSYGSIFFMGTG 199
>UniRef50_Q766W8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Vargula hilgendorfii|Rep: Cytochrome c oxidase subunit 3
- Vargula hilgendorfii (Sea firefly) (Cypridina
hilgendorfii)
Length = 259
Score = 49.2 bits (112), Expect = 9e-05
Identities = 30/98 (30%), Positives = 46/98 (46%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
L P EIG PP I +P PLL T++L+ SG +T +HH++ + Q L
Sbjct: 104 LVPTPEIGLTWPPQGIHIPSPSGAPLLGTLLLLSSGAFLTWSHHAMTTGQDTDVTQGLIW 163
Query: 484 TILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
++LG F + + +GS FF+ TG+
Sbjct: 164 CLILGEGFAVLQASEYACAQFSIADSALGSCFFMLTGL 201
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +3
Query: 504 FYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIRHLNNHFSKNP 683
F +LQA EY A F+IAD G FF IC +RHL F+ N
Sbjct: 171 FAVLQASEYACAQFSIADSALGSCFFMLT-GLHGSHVLIGLSLLEICLVRHLKGQFATNH 229
Query: 684 SL 689
L
Sbjct: 230 HL 231
>UniRef50_Q4KRY0 Cluster: Cytochrome c oxidase subunit 3; n=2;
Crassostrea|Rep: Cytochrome c oxidase subunit 3 -
Crassostrea virginica (Eastern oyster)
Length = 290
Score = 49.2 bits (112), Expect = 9e-05
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFS-QTKQRLF 480
LSP+IEIG PP+ + + PL NT +L+ S +++ AHH ++ + +
Sbjct: 134 LSPSIEIGGCWPPAGLHCLDWSGTPLHNTALLVMSSGSISSAHHFFMDGEWEFGLGVSYY 193
Query: 481 LTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATGI 597
LT+ L + FI ++M L + GS FF+ TG+
Sbjct: 194 LTLYLSYLFIENQYMEYMWLPFTIADGVYGSCFFMLTGL 232
>UniRef50_Q9B8A6 Cluster: Cytochrome c oxidase subunit 3; n=1;
Trichinella spiralis|Rep: Cytochrome c oxidase subunit 3
- Trichinella spiralis (Trichina worm)
Length = 257
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
PP+ + +P +P LNTI+LI S TVT +H N + L LT++L FI
Sbjct: 114 PPTSLNMPSPLGVPSLNTILLITSSATVTMSHFQTSLPN-GKPLNWLLLTLMLSIMFITM 172
Query: 517 KHMNI*KLLLQLLIEFMGSTFFIATGI 597
+++ + GS FF+ TG+
Sbjct: 173 QYVEYHTSTFTMSSGVNGSIFFMTTGL 199
>UniRef50_Q21PS6 Cluster: Cytochrome c oxidase, subunit III; n=3;
Gammaproteobacteria|Rep: Cytochrome c oxidase, subunit
III - Saccharophagus degradans (strain 2-40 / ATCC 43961
/ DSM 17024)
Length = 304
Score = 45.6 bits (103), Expect = 0.001
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 319 EIGRI*PPSRITPFNPFQ-----IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
E+G++ P F F +PL NTIIL+ S VTV AH L ++N Q L +
Sbjct: 147 ELGKVSGPGENMAFPGFGAMFGWLPLWNTIILLSSSVTVHFAHTGLKKDNKKQFNWWLGI 206
Query: 484 TILLGFYFI---FYKHMNI*KLLLQLLIEFMGSTFFIATG 594
T+LLG F+ ++ + + L L G+TFF+ TG
Sbjct: 207 TVLLGIIFLCLQVAEYSHAYHVNLTLDAGVYGNTFFMLTG 246
>UniRef50_Q2GLU5 Cluster: Cytochrome c oxidase, subunit III; n=11;
Rickettsiales|Rep: Cytochrome c oxidase, subunit III -
Anaplasma phagocytophilum (strain HZ)
Length = 285
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Frame = +1
Query: 319 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 498
++ + PP I + + +P +NT+ L+ SG T+T +HH L+ ++ + + L TI LG
Sbjct: 131 KVATVWPPVGIETVSAWSLPFMNTVTLLLSGCTITWSHHYLMIDDIKSSLKMLAFTIGLG 190
Query: 499 -----FYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
F I Y H + L S F++ATG
Sbjct: 191 LVFSTFQLIEYLHAGF-AFSEEGLKAVYSSNFYMATG 226
>UniRef50_Q64LI8 Cluster: Cytochrome c oxidase subunit 3; n=1;
Microstomum lineare|Rep: Cytochrome c oxidase subunit 3
- Microstomum lineare
Length = 245
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +1
Query: 364 PFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLL 543
P +PLLNT +L+ SGV+VT H L + N + L T+ LG +F + +
Sbjct: 115 PAGLPLLNTFLLLSSGVSVTLYHSFLFQGNGGLS--YLIYTLFLGVFFELCQINEYSNSV 172
Query: 544 LQLLIEFMGSTFFIATGI 597
L L G+TFF+ TG+
Sbjct: 173 LSLSSFTYGTTFFMLTGL 190
>UniRef50_O21049 Cluster: Cytochrome oxidase subunit 3; n=9;
Eukaryota|Rep: Cytochrome oxidase subunit 3 -
Dictyostelium discoideum (Slime mold)
Length = 435
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFL 483
LSPNI IG + PP +T ++ +PLLNT++L+ SG +T + L E K L
Sbjct: 159 LSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVL 218
Query: 484 TI 489
+
Sbjct: 219 AV 220
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 465 KTKIIFNYFIRILFYILQAYEYIEASFTIADRIYGIHFF 581
KT++ F ++F Q YEY A F++ D IYG FF
Sbjct: 322 KTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFF 360
>UniRef50_Q1HBC1 Cluster: Cytochrome c oxidase subunit 3; n=1;
Strelkovimermis spiculatus|Rep: Cytochrome c oxidase
subunit 3 - Strelkovimermis spiculatus
Length = 257
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/91 (29%), Positives = 45/91 (49%)
Frame = +1
Query: 319 EIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLG 498
E+G + PP I + + LLN+++L+ S +T +H L+ N +K + +TI LG
Sbjct: 110 EVGLMWPPMGINKVDFMTLALLNSVLLLSSAYFLTISHLMLVTLNKMLSKFFMIITIFLG 169
Query: 499 FYFIFYKHMNI*KLLLQLLIEFMGSTFFIAT 591
F+ Y+ M L GS F++ T
Sbjct: 170 MVFLGYQMMEYMMLEFLWSDSVYGSIFYMTT 200
>UniRef50_Q0I8U0 Cluster: Cytochrome c oxidase subunit III; n=10;
Cyanobacteria|Rep: Cytochrome c oxidase subunit III -
Synechococcus sp. (strain CC9311)
Length = 217
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +1
Query: 370 QIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLLLQ 549
++PL+NT+IL+ S A L + N + LT+ +G YF++ +++ +L
Sbjct: 82 RMPLINTVILVSSSFVAYFAERYLHQKNLWGFRALWLLTMAMGTYFVYGQYVEWSELQFS 141
Query: 550 LLIEFMGSTFFIATG 594
L G TFF+ TG
Sbjct: 142 LSSGVFGGTFFLLTG 156
>UniRef50_Q1YUZ2 Cluster: Cytochrome c oxidase subunit III; n=1;
gamma proteobacterium HTCC2207|Rep: Cytochrome c oxidase
subunit III - gamma proteobacterium HTCC2207
Length = 313
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +1
Query: 373 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIF---------YKHM 525
+PL NT+IL+ S VTV AH L NN Q L T+LLG F+ Y+HM
Sbjct: 178 LPLWNTVILVTSSVTVHIAHTGLKNNNRKQFVGWLGFTVLLGLIFLVLQAEEYIHAYQHM 237
Query: 526 NI*KLLLQLLIEFMGSTFFIATG 594
L L G+TFF+ TG
Sbjct: 238 G-----LTLDSGIYGTTFFMLTG 255
>UniRef50_Q06SB4 Cluster: Cytochrome c oxidase subunit 3; n=1;
Hiatella arctica|Rep: Cytochrome c oxidase subunit 3 -
Hiatella arctica
Length = 275
Score = 41.5 bits (93), Expect = 0.019
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +1
Query: 337 PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFY 516
PP I + IPLLNT++L+ SGVTVT + N T L +I LG F
Sbjct: 125 PPEGIFVVDYAGIPLLNTVLLVSSGVTVTVGLKAAKHYNRISTLWGLKYSIFLGVIFSCL 184
Query: 517 KHMNI*KLLLQLLIEFMGSTFFIATG 594
+ + ++ GS FF+ TG
Sbjct: 185 QLEEYKECYFTMMDGVYGSLFFMMTG 210
>UniRef50_Q8D352 Cluster: CyoC protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
CyoC protein - Wigglesworthia glossinidia brevipalpis
Length = 205
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 FQIPL--LNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFI 510
F+IPL L TIIL+ S +T + A S+ +NN +T LF+T++LG FI
Sbjct: 64 FEIPLVFLETIILLSSSMTCSIASFSIKKNNKIKTNIWLFITVILGIIFI 113
>UniRef50_P41775 Cluster: Cytochrome c oxidase subunit 3; n=132;
Mytilus|Rep: Cytochrome c oxidase subunit 3 - Mytilus
edulis (Blue mussel)
Length = 265
Score = 40.3 bits (90), Expect = 0.043
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 304 LSPNIEIGRI*PPSRITPFNPFQIPLLNTIILIRSGVTVT*AHHSLIENNFSQTK-QRLF 480
LSP+ E+G PP I NP L T +LI SG+ VT AH S+ ++ L
Sbjct: 107 LSPSCELGMRWPPPGIRTPNPSSTSLFETGLLISSGLFVTQAHKSMRLKDYDVGPFIGLV 166
Query: 481 LTILLGFYFIFYKHMNI*KLLLQLLIEFMGSTFFIATG 594
+TI+ G F + + GS F++ TG
Sbjct: 167 VTIVCGTVFFLVQLREYYWNSYTIADSVYGSVFYLLTG 204
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 373 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYF 507
+ LLNT +L+ S TV AHH L F+ + L +TI+LG F
Sbjct: 659 LALLNTFLLVSSSFTVHFAHHDLRRGRFNPFRFGLLVTIILGVLF 703
>UniRef50_Q3AWK7 Cluster: Possible cytochrome c oxidase subunit III;
n=23; Cyanobacteria|Rep: Possible cytochrome c oxidase
subunit III - Synechococcus sp. (strain CC9902)
Length = 209
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 373 IPLLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KLLLQL 552
+P+LNT++L+ S T A ++ ++ ++ ++ L +T LG F+ + + L L
Sbjct: 77 LPILNTVLLLVSSATFHKAGQAIRNSDHARCRRWLLITASLGIAFLISQMVEYFTLPFGL 136
Query: 553 LIEFMGSTFFIATG 594
STFF TG
Sbjct: 137 TDNLYASTFFAVTG 150
>UniRef50_Q36635 Cluster: Cytochrome c oxidase subunit 3; n=3;
Embryophyta|Rep: Cytochrome c oxidase subunit 3 - Pellia
epiphylla
Length = 84
Score = 36.3 bits (80), Expect = 0.71
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +3
Query: 477 IFNYFIRILFYILQAYEYIEASFTIADRIYGIHFFHSNRDXXXXXXXXXXXXXXICYIRH 656
I F+ ++F Q EY+EA FTI+D IYG F S IC IR
Sbjct: 19 IATVFLALVFTGFQGIEYVEAPFTISDGIYGSTSF-SATGFHGFHVIIGTISSIICGIRQ 77
Query: 657 LNNHFS 674
HF+
Sbjct: 78 YLGHFT 83
>UniRef50_Q970H6 Cluster: Putative uncharacterized protein ST1619;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST1619 - Sulfolobus tokodaii
Length = 112
Score = 33.9 bits (74), Expect = 3.8
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 439 LIENNFSQTKQRLFLTILLGFYFIFYKHMNI*KL-LLQLLIEFMGS--TFFIATGISWDS 609
LI N+F T R+F+ L +F FY + I L LL L++ F+ S F IA +SW
Sbjct: 28 LISNSFYIT--RIFIATLFNIFF-FYLFLYIISLPLLSLILSFLISILVFRIAISLSWQD 84
Query: 610 C 612
C
Sbjct: 85 C 85
>UniRef50_Q5V2C4 Cluster: Cytochrome c oxidase polypeptide III; n=6;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide
III - Haloarcula marismortui (Halobacterium marismortui)
Length = 287
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 379 LLNTIILIRSGVTVT*AHHSLIENNFSQTKQRLFLTILLGFYFI 510
++NT++LI S VT+ +H +L N S+ + L T+LLG FI
Sbjct: 151 IVNTLLLIASSVTLHYSHIALRSGNRSRFLKLLGATLLLGIVFI 194
>UniRef50_Q22UV0 Cluster: Hypothetical repeat containing protein; n=1;
Tetrahymena thermophila SB210|Rep: Hypothetical repeat
containing protein - Tetrahymena thermophila SB210
Length = 2718
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 382 LNTIILIRSGVTVT*AHHSLIENNFSQTKQ-RLFLTILLGFYFIFYKHMNI*KLLLQLLI 558
LN I++ + VT I+ FSQ KQ ++++TI L F ++FY + +I K L+ L+
Sbjct: 2331 LNRILIQFFQIFVTFGIILAIQKCFSQRKQKKIYITIYLVFIYLFY-YPSITKFLISLVF 2389
Query: 559 -EFMGSTFFI 585
E +GS ++
Sbjct: 2390 CEQIGSNSYL 2399
>UniRef50_Q0Z880 Cluster: NADH dehydrogenase subunit 4L; n=1;
Agamermis sp. BH-2006|Rep: NADH dehydrogenase subunit 4L
- Agamermis sp. BH-2006
Length = 90
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 499 FYFIFYKHMNI*KLLLQLLIEFMGS----TFFIATGISWDSCNNW 621
F + K+MN+ +LL L+I+ + S F I + SW+ NNW
Sbjct: 38 FLLMILKYMNLEIVLLSLMIQVLDSLIIMVFMIISLFSWEKSNNW 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,977,659
Number of Sequences: 1657284
Number of extensions: 7387006
Number of successful extensions: 14209
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 13767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14143
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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