Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0347
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 5    TRFSLHCYFTSYAMCRQKI 61
            + F + CYFT++A  RQ +
Sbjct: 1821 SEFKVVCYFTNWAWYRQGV 1839



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 11   FSLHCYFTSYAMCRQ 55
            F + CYFT++A  R+
Sbjct: 1398 FKIVCYFTNWAWYRK 1412



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 11   FSLHCYFTSYAMCRQ 55
            + + CYFT++A  RQ
Sbjct: 2321 YKVVCYFTNWAWYRQ 2335


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 423 IRFFVRYKHIMYNILLY 373
           + +F  Y H  Y +LLY
Sbjct: 152 VEYFQNYIHFFYQLLLY 168


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 91  STTNNHLQQQYICYEL 138
           ++TNN + + YICY +
Sbjct: 31  TSTNNEVPRWYICYTI 46


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 354 KRNSVRLSLYERQYVCILMFIYLL*IMKKKHLNSTKYSY-YR 232
           K   ++  L+   + CIL FIYL    +  +L ++K  Y YR
Sbjct: 2   KPGELKRVLFFFSFCCILFFIYLY-WQQTSNLTTSKLLYTYR 42


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 599 SAGPVRHMLINSTNSYVDS 543
           S GPV+ ML N+T+ ++ S
Sbjct: 104 SQGPVKIMLQNATDLFIKS 122


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 320 LSYKLKRTELRFCLFSYLYNKILYIICLYLTKN 418
           +SY+L R ++RF    Y  +  L I   Y  +N
Sbjct: 1   MSYRLSRNDIRFLKVMYKLSHFLSITPNYDFEN 33


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 399 HIMYNILLYKYENKQKRNSVRLS 331
           HI    L Y Y N Q  NS  LS
Sbjct: 54  HIQQQQLQYGYHNHQNYNSNVLS 76


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 399 HIMYNILLYKYENKQKRNSVRLS 331
           HI    L Y Y N Q  NS  LS
Sbjct: 54  HIQQQQLQYGYHNHQNYNSNVLS 76


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 347 LRFCLFSYLYN 379
           L FC+F Y+Y+
Sbjct: 257 LYFCIFGYIYD 267


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 400 FVSDEESNLARLRKLVLALYRHTYIFYEHLSYYTAIRCDNNNF 528
           F   E ++   L +LV       Y+F  +  YY+       NF
Sbjct: 129 FKESERNDYVSLLQLVFVFCYFIYLFTVYYIYYSVHEASIINF 171


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 347 LRFCLFSYLYN 379
           L FC+F Y+Y+
Sbjct: 82  LYFCIFGYIYD 92


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 399 HIMYNILLYKYENKQKRNSVRLS 331
           HI    L Y Y N Q  NS  LS
Sbjct: 54  HIQQQQLQYGYHNHQNYNSNVLS 76


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 399 HIMYNILLYKYENKQKRNSVRLS 331
           HI    L Y Y N Q  NS  LS
Sbjct: 54  HIQQQQLQYGYHNHQNYNSNVLS 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,209
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)