Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0347
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   1.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.8  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   9.0  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 201 RFNLIVCCTHIYSTSILWSLDVFSS 275
           RF+ I CC H    +  W + V+++
Sbjct: 143 RFSKIYCCCHFSMATFFWFMPVWTT 167


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 682 EPDFDPHSIKTLVATIKLFTVALPK 608
           EP FD  S+K +VA  KL TV  PK
Sbjct: 512 EPGFDRRSVKGMVA--KLVTVKDPK 534


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 288  LL*IMKKKHLNSTKYS 241
            +L I+KKKH  S KYS
Sbjct: 2973 VLTILKKKHRRSVKYS 2988


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 402 KHIMYNILLYKYENKQK 352
           KH +Y  L+Y Y N  K
Sbjct: 48  KHRLYQYLMYNYSNDAK 64


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 402 KHIMYNILLYKYENKQK 352
           KH +Y  L+Y Y N  K
Sbjct: 48  KHRLYQYLMYNYSNDAK 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,127
Number of Sequences: 2352
Number of extensions: 14052
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)