Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0347
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi esc...    32   0.84 
AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA...    32   0.84 
BT023410-1|AAY55826.1|  386|Drosophila melanogaster IP10424p pro...    29   4.5  
BT023219-1|AAY55635.1|  386|Drosophila melanogaster IP10724p pro...    29   4.5  
AE014297-1559|ABI31166.1|  388|Drosophila melanogaster CG11598-P...    29   4.5  

>AF441759-1|AAM20923.1| 1276|Drosophila melanogaster ER-golgi escort
           protein protein.
          Length = 1276

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 470 YVCLYNAKTNFLNRAKFDSSSDTNILCTIFYYINMKTSK 354
           Y CL  +  N   +   + + DTNIL TIF Y N++ SK
Sbjct: 243 YGCLLLSPANLWTQNSQNFTRDTNILNTIFQYHNLQKSK 281


>AE013599-134|AAF57291.3| 1276|Drosophila melanogaster CG33131-PA
           protein.
          Length = 1276

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 470 YVCLYNAKTNFLNRAKFDSSSDTNILCTIFYYINMKTSK 354
           Y CL  +  N   +   + + DTNIL TIF Y N++ SK
Sbjct: 243 YGCLLLSPANLWTQNSQNFTRDTNILNTIFQYHNLQKSK 281


>BT023410-1|AAY55826.1|  386|Drosophila melanogaster IP10424p
           protein.
          Length = 386

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 196 VLDLI*LYVAHISIVRVFCGV*MFFLHNLQ*INKH*NTNVLPFI 327
           VL+ +   V  + + RVFC    FFL +   I+KH NT+V+P I
Sbjct: 216 VLNKLLSNVCGLFVARVFCTT--FFLISNGKISKHLNTSVIPLI 257


>BT023219-1|AAY55635.1|  386|Drosophila melanogaster IP10724p
           protein.
          Length = 386

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 196 VLDLI*LYVAHISIVRVFCGV*MFFLHNLQ*INKH*NTNVLPFI 327
           VL+ +   V  + + RVFC    FFL +   I+KH NT+V+P I
Sbjct: 216 VLNKLLSNVCGLFVARVFCTT--FFLISNGKISKHLNTSVIPLI 257


>AE014297-1559|ABI31166.1|  388|Drosophila melanogaster CG11598-PB
           protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 196 VLDLI*LYVAHISIVRVFCGV*MFFLHNLQ*INKH*NTNVLPFI 327
           VL+ +   V  + + RVFC    FFL +   I+KH NT+V+P I
Sbjct: 218 VLNKLLSNVCGLFVARVFCTT--FFLISNGKISKHLNTSVIPLI 259


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,533,036
Number of Sequences: 53049
Number of extensions: 550689
Number of successful extensions: 1097
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)