Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0346
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 46 5e-06
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 38 0.001
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 38 0.002
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 36 0.004
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 36 0.007
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.007
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.037
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 32 0.085
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.26
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 30 0.34
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.46
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 29 0.60
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.60
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 28 1.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.1
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.4
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 27 1.8
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 27 2.4
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 27 2.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 3.2
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 3.2
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.2
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 26 4.2
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 26 4.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.6
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 5.6
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 26 5.6
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 26 5.6
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 7.4
SPBC1734.07c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 25 7.4
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 25 9.8
SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomy... 25 9.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 9.8
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 25 9.8
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 9.8
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/102 (24%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +2
Query: 212 REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDAD---GKSDEVSRKLAFVEDELEV 382
+EQ Y +S+ + E ++++L + K+ RL A++ D +++++SRK+ +E+ELE
Sbjct: 39 KEQEY-ESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELET 97
Query: 383 AEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEE 508
+ ++ K+ + + + + ++SLE + Q++EE
Sbjct: 98 NDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 25.0 bits (52), Expect = 9.8
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +2
Query: 266 RMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAED-----RVKSGDXKISELE 430
R + +LKE L + + + +SRK E +LE E+ R+K+ + I + E
Sbjct: 21 RAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTE 80
Query: 431 EELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E + ++ LE E ++ + E+ +R
Sbjct: 81 AE--QLSRKVELLEEELETNDKLLRETTEKMR 110
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Frame = +2
Query: 254 EDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED---ELEVAEDRVKSGDXKISE 424
E +ER++ LT + + A+D++GK VS++ A +E+ +L + E+ + + K++
Sbjct: 169 ELKERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNG 228
Query: 425 LEEELKV----VGNSLKSLEVSEEKANQR 499
E++LK + N L +E E+ N+R
Sbjct: 229 KEDDLKKREKDLENRLLKVEEHEKSLNER 257
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 37.5 bits (83), Expect = 0.002
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +2
Query: 53 KDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHRPTEAARGPAVG*REQPYVQ 232
++L K K+LT+ AE A+ ++++ + + H+ E+A A ++ + Q
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLK--------DSNHQLQESASSDAEQITKEQFEQ 1488
Query: 233 SVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSD--EVSRKLAFVEDELEVAEDRVKSG 406
E+ ++E D N+L+ + A DADGK++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADS-KNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNL 1547
Query: 407 DXKISELEEELKVVGNSLKSLEVSEEKANQR 499
+++ L E G SLE ++E A R
Sbjct: 1548 SAELAALREHSPTQG----SLENADEIARLR 1574
Score = 29.1 bits (62), Expect = 0.60
Identities = 19/97 (19%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 266 RMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKS----GDXKISELEE 433
R++QLTN+L+ + ++ + + K +E L + +++ + S K+++LE+
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQLQLTSLTSERSLALEKLNDLEK 730
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLRP*SGKL 544
L + S L+ S + +++ + ++ S +L
Sbjct: 731 SLVLSERSKDELDESYKSLQEQLASKKIEVQNVSSQL 767
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 36.3 bits (80), Expect = 0.004
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Frame = +2
Query: 11 EDLILNKNKLEQANKDLEEKEKQL----TATEAEVAALNRKVQQIXGRPREI*GEVRHRP 178
ED++L LE+ LE K + L + ++L +++ + + REI E H
Sbjct: 424 EDIMLQFRSLEEERDVLESKLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLR 483
Query: 179 TEAARGPAVG*REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADG---KSDEVSR 349
A++ E + E E E + +N L E L E+ +G K D +++
Sbjct: 484 LLASKNSDKALAETNI--RLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITK 541
Query: 350 KLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
+ + +ELE R+KS + +SEL + N LK E + + + + LR
Sbjct: 542 EKDRLINELE---QRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLR 597
Score = 28.7 bits (61), Expect = 0.80
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = +2
Query: 29 KNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQ 130
+N+L++ +++L+ + LT E E+A L R++++
Sbjct: 291 QNRLDELSEELDVAQDLLTEKEDEIATLKRQIEE 324
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +2
Query: 224 YVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVA-EDRVK 400
Y+ V + E + + T +++ E + D +S ++ + EV E ++
Sbjct: 231 YLSKVND--VEQSQNVKVFTERIRFLENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIR 288
Query: 401 SGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEESRSS 520
++ EL EEL V + L E +++EE +S
Sbjct: 289 QLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENS 328
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 35.5 bits (78), Expect = 0.007
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +2
Query: 242 EQGTEDEERMDQLTNQLKEARLLAEDADG----KSDEVSRKLAFVEDELEVAEDRVKSGD 409
E T + D+ + +E RLL E A KS EVS L+ E+ ED + S D
Sbjct: 546 ELETMHRSQRDKQESTERELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSKD 605
Query: 410 XKISELEEELKVVGNSLKSL--EVSEEKANQRVEESRSSLR 526
+++ L ELK N + L E EE Q+ S L+
Sbjct: 606 RELANLGVELKSTENRYRQLLQEKEEELEIQKAAVDESLLQ 646
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.5 bits (78), Expect = 0.007
Identities = 22/95 (23%), Positives = 46/95 (48%)
Frame = +2
Query: 260 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEEL 439
E+ + LK++R + + E+ + +L AE ++ S + + L+ +
Sbjct: 349 EKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSI 408
Query: 440 KVVGNSLKSLEVSEEKANQRVEESRSSLRP*SGKL 544
N+L S + ++ + ++EE+RSSL +GKL
Sbjct: 409 DEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKL 443
Score = 31.1 bits (67), Expect = 0.15
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +2
Query: 260 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEEL 439
EER D L N+L + + D+D + L V DEL+ + S + SE+ ++
Sbjct: 1172 EERSD-LANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDR 1230
Query: 440 KVVGNSLKSLEVSEEK 487
+ +SLK E S K
Sbjct: 1231 DDLLDSLKGCEESFNK 1246
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 425 LEEELKVVGNSLKSLEVSEEKANQRVEESRSSLRP*SGKLK 547
LE+E + + LKSLE ++ + EE L +GKLK
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLK 937
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.1 bits (72), Expect = 0.037
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = +2
Query: 260 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEEL 439
+E +++LT+++ + D + DE+ ++L +E+E A++ S K S L E+L
Sbjct: 598 KEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTS---KTSNLLEQL 654
Query: 440 KVVGNSLKSLEVSEEKANQRVEESRSSL 523
K+ + SL E+ Q + S L
Sbjct: 655 KMTEAEVDSLRKENEENKQVIALKESEL 682
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 31.9 bits (69), Expect = 0.085
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 254 EDEERMDQ-----LTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKI 418
E EER+ + LT L+E+ E D K +++ + ++DE + + + I
Sbjct: 462 EMEERVSEVERTFLTKLLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKTETIAQLEQII 521
Query: 419 SELEEELK-VVGNSLKSLEVSEEKANQRVEESRSSL 523
EL EEL+ + S+K +++ NQ SR L
Sbjct: 522 EELHEELRSLEEESIKESSATQQNENQHKRSSRKLL 557
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 186 LLEAQQSADENNRMCKVLENRAQRTRSVWTS--SPTN*KRPVSSPRTLTENPTRFRENWP 359
L+E +S +EN + + + +R+ S+ S P+N K PV R+ + R ++NW
Sbjct: 195 LVERLKSIEENLQSLQERISHCERSVSLSPSFAPPSNVKSPVQQHRSFVSSSARAKKNWG 254
Query: 360 SLKTNSKSPK 389
+ S K
Sbjct: 255 RQSNSPNSNK 264
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +2
Query: 341 VSRKLAFVEDEL-------EVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQR 499
+ R+L VEDEL V + R + + +IS+L + L+ N+++ L++ EK+ ++
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKK 578
Query: 500 VEE 508
E+
Sbjct: 579 NED 581
Score = 29.9 bits (64), Expect = 0.34
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Frame = +2
Query: 5 TREDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHRPTE 184
T +L L+ K ++ N+DL + E + E+A L +++ + + V+ E
Sbjct: 564 TVRELKLDLEKSKKKNEDLSKLEVEKVE---EIANLKKELTHLAKQQEFGFKYVQEFSNE 620
Query: 185 AARGPAVG*REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGK----SDEVSRK 352
+G + E+ Y + + +E D +TNQ + A A + + E R
Sbjct: 621 DLQGKLIEANEKNY--KLTQLLKTQKEDADFITNQYQNASTFAAEQSKEVAKLQAECKRL 678
Query: 353 LAF---VEDELEVAED-RVKSGDXKISELEEELKVV 448
A V +E++V D RV++ K+S LEE LK++
Sbjct: 679 QAINSKVMEEVKVYNDSRVEALLAKVSSLEETLKIL 714
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 29.5 bits (63), Expect = 0.46
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 233 SVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVK-SGD 409
S+ ++ E +ER+D LTN L E LL E K DE ++ ++L+ E R K S D
Sbjct: 215 SLVDERNEMQERLDILTNLLDELTLLYE--TDKFDETMKEAILSFEDLKEQEIRRKVSSD 272
Query: 410 XKISELE 430
+ LE
Sbjct: 273 DVHNYLE 279
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 29.1 bits (62), Expect = 0.60
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = +2
Query: 215 EQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED--ELEVAE 388
+ PY + V + EE + Q E + +D + EV R A E ELE
Sbjct: 13 QHPYEKEVNGKLMSQEEILSQKLVAAIERQAALDDK--YATEVHRNEALSERIRELEAKL 70
Query: 389 DRVKSGDX---KISELEEELKVVGNSLKSLEVSEEKANQRVEESRSSL 523
KS D K LEE+L++ ++ E + + +E+ SSL
Sbjct: 71 SAKKSFDEELVKFHNLEEKLQLTETKCRNAESEKSRVENELEDLTSSL 118
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.60
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 341 VSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRV 502
VSR + + E+ E +K +SELE EL+ S L++ EK +++
Sbjct: 728 VSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKI 781
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 308 LAEDADGKSDEVSR--KLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSE 481
L DAD S + S+ + + + D+ +V++ +S +L +++ + K+ ++++
Sbjct: 59 LVNDADDDSQKSSKWEQSSTMSDDTDVSDRHAESMSQIRGKLASKIQDLREKRKAGDLNQ 118
Query: 482 EKANQRVEESRSSLRP*SGKLK 547
++ N+R E+ + SGK K
Sbjct: 119 KRQNKRPVENEKDSQKGSGKSK 140
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/63 (22%), Positives = 35/63 (55%)
Frame = +2
Query: 335 DEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEESR 514
D+ + + F E + E A + + ++ +LEE+++ L++++ S + QR+E+ +
Sbjct: 585 DQQTTEAPFEEPD-EPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKK 643
Query: 515 SSL 523
+ L
Sbjct: 644 TRL 646
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 263 ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELK 442
ER+ L NQ+ A E + + LA + E+ D + + K+S ++++ +
Sbjct: 902 ERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQ 961
Query: 443 VVGNSLKSLE 472
+ + K LE
Sbjct: 962 TISSKYKELE 971
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = +2
Query: 323 DGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRV 502
+ + + V R L E++L++ + + ++ + E+ N L+SLE + + R+
Sbjct: 844 ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRI 903
Query: 503 EE 508
E+
Sbjct: 904 EQ 905
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 EDRVKSGDXKISELEEELKVVGNSLKSLEV---SEEKANQRVEESRSSL 523
E+R+K+ D I EE+ K + ++++SLE+ EKAN++ + S L
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEMIINVLEKANEKPVITNSPL 95
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 17 LILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQI 133
L+ N L + D EEK Q+ A EV A N+++QQ+
Sbjct: 163 LVAKVNFLSKHLHDNEEKLMQVNAKMDEVLAENKRLQQL 201
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +3
Query: 171 TAQQKLLEAQQSADENNRMCKVLENRAQRTRSVWTSSPTN*KRPVSSPRTLTENPTRFRE 350
++Q L + + +E+N K + +++ ++SP++ K+ + P ++ F
Sbjct: 36 SSQTYLSKRSEKLNEHNSKLKSSGSFTSNSQTDLSNSPSSKKKNIFYPIARAKHSFYFNH 95
Query: 351 NWPSLKTNSKSP 386
NW S + SP
Sbjct: 96 NWSSDLQQANSP 107
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 258 TRSVWTSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 425
T VW+++ PVS+P T + + F ++P+ + S S SS S S
Sbjct: 122 TAPVWSNTSV----PVSTPETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYS 173
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 327 ENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 473
EN R ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 7 ENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 177 QQKLLEAQQSADENNRMCKVLENRAQRTRSVWTSSPTN*KRPVSSPRTLTENP-TRFREN 353
+ K++ + + N R+ + ++RT+S+ SP ++P T + P T +E+
Sbjct: 384 ESKVVTRRTGSGNNYRVGLRNVSGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKES 443
Query: 354 WPSLKTNSKSPKTVSS 401
W + S ++ ++
Sbjct: 444 WTNQGIKSSQQRSANA 459
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 26.2 bits (55), Expect = 4.2
Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +3
Query: 138 EDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQRTRSVWTSSPTN*KRPVSSPR 317
E+++ E++ + +++ +A+ A E+ + + A++ + T +P R
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKEAKKAK---TEAPVEAANKSLRSR 150
Query: 318 TLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPL--NLSKY 476
T P + +K+PK ++L QSLKK +S++ P+ N+S +
Sbjct: 151 KKTPEIAAPANIEPEVAPTTKTPKKRAALSNEEKQSLKKF-QSAMLPMLDNISNH 204
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 11 EDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNR 118
ED+I+ + E+ KD EKEK+ E E L+R
Sbjct: 424 EDIIIFVDPFEEWKKDEREKEKRKRQEEEEENNLDR 459
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.6
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +3
Query: 273 TSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSV 452
+SSPT+ +SS + + +PT ++ ++S S + SS TL S S+ + S
Sbjct: 280 SSSPTSTSSTISSSSSSSSSPT---STSSTISSSSSSSSSFSS--TLSSSSMSSSSSFSS 334
Query: 453 TPLNLSKYPKRKLTSASKS 509
+P + S +S S S
Sbjct: 335 SPTSSSSTISSSSSSPSSS 353
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 23 LNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGR 142
L++ +L + LEE++K + + LNR ++ GR
Sbjct: 2260 LHRKRLNEEGITLEERQKPEILNQRAITVLNRVSNKLTGR 2299
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 32 NKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHRPTEAARGPA 202
N+L K+LEE K TA +A L R+ ++ R +I ++ ++ A A
Sbjct: 278 NRLSTIEKELEELSKDQTADQAISRRLERERDELDLRLLDIQNKLSEMDSDRAESRA 334
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 314 EDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSE-EKA 490
E+ D D R F E E ++ SG + +EL+EE NS+K + + E EK
Sbjct: 59 EERDAHLDRFRRDSTF---ESETSDHEDFSGGSE-NELDEETTKNANSIKKISLEEVEKQ 114
Query: 491 NQRVEES 511
+ ++ S
Sbjct: 115 RKAIKRS 121
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 29 KNKLEQANKDLEEKEKQLT 85
K K+++ NK+LE+ E QLT
Sbjct: 228 KEKIDKLNKELEKVEPQLT 246
>SPBC1734.07c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 7.4
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +2
Query: 260 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEEL 439
EER+ L+N E RLL E + +S +AF + + V++ D + + +
Sbjct: 299 EERLHLLSNTDTEIRLLFESDNESLRRLSSHIAF-NGIVSYLDKCVRAWDDQYASPRRGI 357
Query: 440 --KVVGNSLKSLEVSEEKANQRVEESRSSLRP 529
K++ S K L S N S ++ RP
Sbjct: 358 TGKLLFASRKYLSSSNASTNSNYFPSSNAYRP 389
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 309 SPRTLTENPTRFRENWPSLKTNSKSP 386
+P LTE+ N PS + NSKSP
Sbjct: 630 TPEDLTEDVPFLHFNVPSSRPNSKSP 655
>SPAC11H11.03c |||SMR and DUF1771 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 206
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/56 (17%), Positives = 28/56 (50%)
Frame = +2
Query: 236 VGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKS 403
+ ++G ERM+ Q A L +++ DE+ ++++ ++ + R+++
Sbjct: 40 LSQEGKLCGERMENYNRQAASAIYLYKNSQCNPDEIDLHGLYIDEAVQAVQQRIEN 95
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 35 KLEQANKDLEEKEKQLTATEAEVAALNRKVQ 127
KLE +++ +++ EK+L + LN K+Q
Sbjct: 218 KLEVSSRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 25.0 bits (52), Expect = 9.8
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 293 KEARLLAEDADGKSDEVSRKLAFVEDE-LEVAEDRVKSGDXKISELEEELKVVGNSLKSL 469
+E+ AE K+ + +DE L + R+K + EEE+ VVG+ LKS
Sbjct: 225 EESEQAAEGDTAKNSGTDAQAPLSDDEWLRLHRTRIKE-----KQPEEEVSVVGDELKSF 279
Query: 470 E 472
+
Sbjct: 280 D 280
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 9.8
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +2
Query: 275 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGN 454
Q+T L++ + L + + + D + + + ++ L AED KS S+ +E+LK
Sbjct: 307 QMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDEQKSRS-MFSKNDEKLK---- 361
Query: 455 SLKSLEVSEE 484
KSLE+ E+
Sbjct: 362 --KSLELMED 369
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,059,820
Number of Sequences: 5004
Number of extensions: 35486
Number of successful extensions: 218
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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