Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0346
(667 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 40 7e-05
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 33 0.008
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 30 0.057
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.100
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 29 0.100
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 28 0.30
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 28 0.30
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 28 0.30
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 28 0.30
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 27 0.53
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 26 0.93
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 24 3.7
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 5.0
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 24 5.0
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 6.5
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 23 6.5
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 8.7
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 39.9 bits (89), Expect = 7e-05
Identities = 17/78 (21%), Positives = 47/78 (60%)
Frame = +2
Query: 263 ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELK 442
+++D+L+ + + + + ++ + K+ +EDE+E A+ ++ G+ + ++LEEE
Sbjct: 907 KQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEAN 966
Query: 443 VVGNSLKSLEVSEEKANQ 496
+ L+ ++++ EKA++
Sbjct: 967 KLREELEEMKLAIEKAHE 984
Score = 27.5 bits (58), Expect = 0.40
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 335 DEVS--RKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVS-EEKANQRVE 505
DEV+ RKL + E E ++ ++ LEE L V L++ + +E AN+
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEE-R 558
Query: 506 ESRSSLRP*SGKLK 547
E +LR GKL+
Sbjct: 559 ELTQTLRAVQGKLQ 572
Score = 25.0 bits (52), Expect = 2.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Frame = +2
Query: 41 EQANKDLEEK-------EKQLTATEAEVAALNRKVQQIXGRPREI 154
E+ KDLEEK E+ L T E+ +K+Q+ RE+
Sbjct: 516 EETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEEREL 560
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.008
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +2
Query: 287 QLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKS 466
+LKE R E+ DG+ K + E++ A+DR+K+ + + ++++ V KS
Sbjct: 231 ELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV-VTAKDEKS 289
Query: 467 LEVSEEK 487
+ +E +
Sbjct: 290 VLATEHQ 296
Score = 27.5 bits (58), Expect = 0.40
Identities = 35/169 (20%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +2
Query: 5 TREDLILNKNKLEQA-NKDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHRPT 181
+R L + KNKLE +L ++ +L E++ +RK Q R + E R +
Sbjct: 817 SRMSLEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKV 876
Query: 182 EAARGPAVG*REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAF 361
++ +++ +Q T +E ++ + KEA+ E+ + ++ + K
Sbjct: 877 LTDTEEV----DRKLSEALKQQKTLQKE-LESWIQKEKEAQEKLEEDGKRMEKWATKENM 931
Query: 362 VEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEE 508
+ +++ +++ +G + ++ + + SLKSL EKANQ +++
Sbjct: 932 LRQKIDECTEKI-AGLGALPNVDASYQKM--SLKSLFKELEKANQHLKK 977
Score = 25.8 bits (54), Expect = 1.2
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 293 KEARLLAEDADGKSDEVSRKLAFVEDELEVAED 391
+E+ L +++GK +++S L +ED L+ E+
Sbjct: 173 EESMNLLRESEGKLEKISEYLRTIEDRLKTLEE 205
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 30.3 bits (65), Expect = 0.057
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Frame = +2
Query: 17 LILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHRPTEAARG 196
++L+ ++ + L+EKE +L AEV+ + + + G+ +E + + +
Sbjct: 672 VLLDVAEINRIQAMLQEKEAELRDISAEVSKIEKTAHRF-GQLKEQHDMLNYELNNLKQR 730
Query: 197 PAVG*REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLA----FV 364
A Q Q E+ E ++++ L + EAR K ++ K+A
Sbjct: 731 LA-----QTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHR 785
Query: 365 EDELEVAEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRV 502
E EL+ AE+ +K K E + K ++L++ E+ + +
Sbjct: 786 ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGI 831
Score = 23.4 bits (48), Expect = 6.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 TREDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXG-RPREI 154
T+E++ K+E K + E + T A+V L K+ G R RE+
Sbjct: 739 TKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHREREL 789
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.5 bits (63), Expect = 0.100
Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 29 KNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGRPREI*GEVRHR--PTEAARGPA 202
+N+L+ + DLE +K + + ++ R++ QI + EI ++ R + +
Sbjct: 722 ENRLKYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERRMQQRDMKIQDIKESM 781
Query: 203 VG*REQPYVQSVGEQGTEDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEV 382
+ Y + G + + ++ +E L E A K E +++ + + LE
Sbjct: 782 NNVEDDVYAEFCARIGVANIRQFEE-----RELVLQQERAK-KRAEFEQQIDRINNNLEF 835
Query: 383 AEDRVKSGDXKISELEEELKVVGNSLKSLEVSEEKANQRVEESRSSL 523
+R K + E ++ +SL++ + +E + Q +E+ + +
Sbjct: 836 --ERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDKEKI 880
Score = 27.9 bits (59), Expect = 0.30
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 290 LKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEEELKVVGNSLKSL 469
++E L + AD S + L V E + +DR+ S K +++EE K + +
Sbjct: 382 VQEYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEA 441
Query: 470 EVSEEKANQRVEESRSSL 523
+EK ++ SR L
Sbjct: 442 LKRQEKLIDHIKTSRLGL 459
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.100
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 226 CAKCWRTGHRGRGAYGP 276
C KCW TGH R GP
Sbjct: 418 CFKCWETGHFSRDCKGP 434
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 27.9 bits (59), Expect = 0.30
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEE 433
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E V ++LK L+ ++E+A + V E +L+
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAEGDGTLQ 236
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 27.9 bits (59), Expect = 0.30
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEE 433
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E V ++LK L+ ++E+A + V E +L+
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAEGDGTLQ 236
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 27.9 bits (59), Expect = 0.30
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEE 433
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E V ++LK L+ ++E+A + V E +L+
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAEGDGTLQ 236
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 27.9 bits (59), Expect = 0.30
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +2
Query: 269 MDQLTNQLKEARLLAEDAD--GKSDEVSRKL-AFVEDELEVAEDRVKSGDXKISELEEEL 439
++Q+ ++ ++ +D++ GK V K+ VED + K+ + + ELE L
Sbjct: 1054 LNQILQDIQSKPIVIDDSEFAGKLHAVQEKIDILVEDAKSGSGVGEKTLNEILRELEARL 1113
Query: 440 KVVGNSLKSLEVSEEKANQRVEESRSSLRP*SGKLK 547
+ V L + + S+E N ++ + + +GK++
Sbjct: 1114 QEVQKLLDNADQSQEVTNHKISKGGYNATLANGKIQ 1149
Score = 27.9 bits (59), Expect = 0.30
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEE 433
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 1292 DIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 1346
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E V ++LK L+ ++E+A + V E +L+
Sbjct: 1347 EDAV--DALKQLKYAKEQAEKAVAEGDGTLQ 1375
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 27.1 bits (57), Expect = 0.53
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 DEERMDQLTNQL-KEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDXKISELEE 433
D +++ + NQ +EA +AED K + ++ L V +E+AE + + L++
Sbjct: 153 DIDKIKKEANQYNREADRIAEDLATKMRDHAQLLENVGTNIELAETLLDR-----ASLQK 207
Query: 434 ELKVVGNSLKSLEVSEEKANQRVEESRSSLR 526
E V ++LK L+ ++E+A + V E +L+
Sbjct: 208 EDAV--DALKQLKYAKEQAEKAVAEGDGTLQ 236
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 26.2 bits (55), Expect = 0.93
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 226 CAKCWRTGHRG 258
C KCW+ GH+G
Sbjct: 330 CFKCWKLGHKG 340
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 24.2 bits (50), Expect = 3.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 226 CAKCWRTGHRGRGAYGP 276
C +CW+T H + GP
Sbjct: 431 CYRCWQTDHISQDCCGP 447
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.8 bits (49), Expect = 5.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -1
Query: 382 DFEFVFNEGQFSRNLVGFSVSVLGEETGLFQLVGELVHTLLVLCALFSNTLHIR 221
D E N+GQ S NL+ ++ L E ++ L L CA +++H+R
Sbjct: 3301 DVEVYLNKGQGSMNLLDERINALEAEIKEDFILQRLQSVLREHCAT-DSSVHVR 3353
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.8 bits (49), Expect = 5.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 297 RPVSSPRTLTENPTRFRENWPSLKTNSKSP 386
RP++ TL NPT FR + S S P
Sbjct: 416 RPLTPGGTLPHNPTYFRTVYSSSDDGSIGP 445
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = +2
Query: 8 REDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIXGRPR 148
+ ++ L N + EEK + A ++E + ++++Q PR
Sbjct: 466 QREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQLEQFESAPR 512
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.4 bits (48), Expect = 6.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 226 CAKCWRTGH 252
C KCW+ GH
Sbjct: 277 CYKCWKVGH 285
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.0 bits (47), Expect = 8.7
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 458 LKSLEVSEEKANQRVEESRSSLR 526
LKS + +KA+QR++E + +++
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIK 241
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,555
Number of Sequences: 2352
Number of extensions: 8879
Number of successful extensions: 48
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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