Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0345
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 235 RERGVVLAIWVF*AAGNLQFRLLYQER 155
           R R ++LA W F A  +L   + Y+E+
Sbjct: 138 RARYLILAAWFFSALYSLPILIFYEEK 164


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = -3

Query: 585 YYSSNHINNSPTTFSSMTLP---FPIQEFPCLVLTETS 481
           YY +NH N  P   S    P     I   P  V TE+S
Sbjct: 437 YYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQTESS 474



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 594 QKYYYSSNHINN 559
           Q+YYY+ NH N+
Sbjct: 357 QQYYYNKNHPNS 368


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 87  NHFLFLMDCIGDLFYRIMNIC 25
           NHFL L+D +  +   + N+C
Sbjct: 205 NHFLALLDIVHGVHNELCNLC 225


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = -3

Query: 585 YYSSNHINNSPTTFSSMTLP---FPIQEFPCLVLTETS 481
           YY +NH N  P   S    P     I   P  V TE+S
Sbjct: 385 YYENNHYNGDPNYISPEVFPNTNNAIMTPPASVQTESS 422



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 594 QKYYYSSNHINN 559
           Q+YYY+ NH N+
Sbjct: 305 QQYYYNKNHPNS 316


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 117 ICFRFVNYFFNH-FLFLMDCIGDLFYRIMNICLHIVK 10
           +CF    Y F H F F   C   +   ++NI +H+ +
Sbjct: 62  VCFNSYMYAFTHIFFFFAICCDFIALIVVNI-VHVFR 97


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 576 SNHINNSPTTFSSMTLPFPI 517
           S+H+   P+ F+S   PF I
Sbjct: 353 SHHLKQEPSGFTSSNHPFSI 372


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 528 PFPIQEFPCLVLTETSSQIDPS 463
           PFP  ++P  +L+   SQ+  S
Sbjct: 166 PFPAGQYPYPILSPEMSQVAAS 187


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 528 PFPIQEFPCLVLTETSSQIDPS 463
           PFP  ++P  +L+   SQ+  S
Sbjct: 58  PFPAGQYPYPILSPEMSQVAAS 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,991
Number of Sequences: 336
Number of extensions: 2978
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)