Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0345
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    25   3.0  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   5.2  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.0  

>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = +3

Query: 249 QSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPI----VRSEDHIDSHV 416
           + A    SD +++ G ++ E    A+D  S   G  ++  + M        S+D +    
Sbjct: 68  EGAEDAGSDAEADAGAADGEE--GATDTESGAEGDDSEMDSAMKEGEEGAGSDDAVSGAD 125

Query: 417 DETNEESDVVVNKLEEKG 470
           DET E  D      EE G
Sbjct: 126 DETEESKDDAEEDSEEGG 143


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 666 KLFET*LGDLASNHETYFIT 607
           ++FE  LGD  +N E YFIT
Sbjct: 202 RVFELGLGDDDANIEDYFIT 221


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 160 PDKVVEIANSPLPKTPILQELLHVPDISQLSPLTVS 267
           P+K+  I +   P  P+     H P  SQ +P +V+
Sbjct: 367 PEKLNTIIDELFPSHPVTDWPTHQPTTSQENPESVT 402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,293
Number of Sequences: 2352
Number of extensions: 11263
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)