Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0345
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein. 31 3.8
BC014268-1|AAH14268.1| 810|Homo sapiens zinc finger CCCH-type c... 31 3.8
AB014563-1|BAA31638.2| 816|Homo sapiens KIAA0663 protein protein. 31 3.8
BC132717-1|AAI32718.1| 1132|Homo sapiens phosphodiesterase 4D in... 31 5.1
BC078660-1|AAH78660.1| 1132|Homo sapiens phosphodiesterase 4D in... 31 5.1
BC004860-1|AAH04860.1| 676|Homo sapiens PDE4DIP protein protein. 31 5.1
AL590452-2|CAH72522.1| 1132|Homo sapiens phosphodiesterase 4D in... 31 5.1
AL138796-2|CAI22822.1| 1132|Homo sapiens phosphodiesterase 4D in... 31 5.1
AB007946-1|BAA32322.2| 1148|Homo sapiens KIAA0477 protein protein. 31 5.1
BX537570-1|CAD97787.1| 1004|Homo sapiens hypothetical protein pr... 30 6.7
AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating p... 30 6.7
AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating p... 30 6.7
AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating p... 30 6.7
AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein. 30 6.7
Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein ... 30 8.9
>BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein.
Length = 611
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 219 TTPRSRYITTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSED 398
+T R + + A KH +++E +S+ +T TC K + KT + PIV S
Sbjct: 399 STIRIKTFSEVLAEKKHRQQEAERQKSKKDT-TCIKLKIDSEIKKTV---VLPPIVASRG 454
Query: 399 HIDSHVDETNEESDVVVNKLEE 464
+ +T +V + LEE
Sbjct: 455 QSEEPAGKTKSMQEVHIKTLEE 476
>BC014268-1|AAH14268.1| 810|Homo sapiens zinc finger CCCH-type
containing 11A protein.
Length = 810
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 219 TTPRSRYITTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSED 398
+T R + + A KH +++E +S+ +T TC K + KT + PIV S
Sbjct: 399 STIRIKTFSEVLAEKKHRQQEAERQKSKKDT-TCIKLKIDSEIKKTV---VLPPIVASRG 454
Query: 399 HIDSHVDETNEESDVVVNKLEE 464
+ +T +V + LEE
Sbjct: 455 QSEEPAGKTKSMQEVHIKTLEE 476
>AB014563-1|BAA31638.2| 816|Homo sapiens KIAA0663 protein protein.
Length = 816
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 219 TTPRSRYITTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSED 398
+T R + + A KH +++E +S+ +T TC K + KT + PIV S
Sbjct: 405 STIRIKTFSEVLAEKKHRQQEAERQKSKKDT-TCIKLKIDSEIKKTV---VLPPIVASRG 460
Query: 399 HIDSHVDETNEESDVVVNKLEE 464
+ +T +V + LEE
Sbjct: 461 QSEEPAGKTKSMQEVHIKTLEE 482
>BC132717-1|AAI32718.1| 1132|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 1132
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 248 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 300
>BC078660-1|AAH78660.1| 1132|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 1132
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 248 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 300
>BC004860-1|AAH04860.1| 676|Homo sapiens PDE4DIP protein protein.
Length = 676
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 248 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 300
>AL590452-2|CAH72522.1| 1132|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 1132
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 248 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 300
>AL138796-2|CAI22822.1| 1132|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 1132
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 248 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 300
>AB007946-1|BAA32322.2| 1148|Homo sapiens KIAA0477 protein protein.
Length = 1148
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 243 TTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRSEDH 401
+ Q++ + DE++E E C SD +PQ G K + + +++ D+
Sbjct: 264 SVQASPPQQKDEETERSAKELGKCDCCSDDQAPQHGCNHKLELALSMIKGLDY 316
>BX537570-1|CAD97787.1| 1004|Homo sapiens hypothetical protein
protein.
Length = 1004
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 273 DEKSETGQSENETITCASDKSSPQAGKTAKTQAV-MPIVRSEDHIDSHVDETNEESDVVV 449
D++ ETG+S + ++ AS K +PQ+ + A T + +P+ + + ET E+SD +
Sbjct: 503 DQQVETGKSPS--LSGASAKPAPQSSENAGTSDLELPVSQRNQDLSLQEAET-EQSDTLD 559
Query: 450 NK 455
NK
Sbjct: 560 NK 561
>AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 273 DEKSETGQSENETITCASDKSSPQAGKTAKTQAV-MPIVRSEDHIDSHVDETNEESDVVV 449
D++ ETG+S + ++ AS K +PQ+ + A T + +P+ + + ET E+SD +
Sbjct: 673 DQQVETGKSPS--LSGASAKPAPQSSENAGTSDLELPVSQRNQDLSLQEAET-EQSDTLD 729
Query: 450 NK 455
NK
Sbjct: 730 NK 731
>AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 273 DEKSETGQSENETITCASDKSSPQAGKTAKTQAV-MPIVRSEDHIDSHVDETNEESDVVV 449
D++ ETG+S + ++ AS K +PQ+ + A T + +P+ + + ET E+SD +
Sbjct: 673 DQQVETGKSPS--LSGASAKPAPQSSENAGTSDLELPVSQRNQDLSLQEAET-EQSDTLD 729
Query: 450 NK 455
NK
Sbjct: 730 NK 731
>AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating
protein 10 protein.
Length = 1957
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 273 DEKSETGQSENETITCASDKSSPQAGKTAKTQAV-MPIVRSEDHIDSHVDETNEESDVVV 449
D++ ETG+S + ++ AS K +PQ+ + A T + +P+ + + ET E+SD +
Sbjct: 673 DQQVETGKSPS--LSGASAKPAPQSSENAGTSDLELPVSQRSQDLSLQEAET-EQSDTLD 729
Query: 450 NK 455
NK
Sbjct: 730 NK 731
>AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein.
Length = 1944
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 273 DEKSETGQSENETITCASDKSSPQAGKTAKTQAV-MPIVRSEDHIDSHVDETNEESDVVV 449
D++ ETG+S + ++ AS K +PQ+ + A T + +P+ + + ET E+SD +
Sbjct: 660 DQQVETGKSPS--LSGASAKPAPQSSENAGTSDLELPVSQRNQDLSLQEAET-EQSDTLD 716
Query: 450 NK 455
NK
Sbjct: 717 NK 718
>Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein
p130 protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = +3
Query: 213 ARTTPRSRYITTQSAHSKHSDEKSETGQSENETITCASDKSSPQAGKTAKTQAVMPIVRS 392
A TTP + +++ + S +E+ + +++ + A S+P K+ TQ V
Sbjct: 256 AATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSYAPPPSAPPPKKSLGTQPPKKAVEK 315
Query: 393 EDHIDSHVDETNEESD 440
+ ++S +++++ESD
Sbjct: 316 QQPVESS-EDSSDESD 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,779,177
Number of Sequences: 237096
Number of extensions: 1685980
Number of successful extensions: 4763
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -