Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0344
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   183   2e-46
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   183   2e-46
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   183   2e-46
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   183   2e-46
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   157   2e-38
BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p pro...    31   1.9  
AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-P...    31   1.9  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.9  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  183 bits (445), Expect = 2e-46
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +1

Query: 1   RHEARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 180
           R  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSS
Sbjct: 3   RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSS 62

Query: 181 EALEAGRICCNKYLVKXCGKDQFHI 255
           EALEAGRICCNKYLVK CGKDQFHI
Sbjct: 63  EALEAGRICCNKYLVKYCGKDQFHI 87



 Score =  179 bits (435), Expect = 4e-45
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQ 434
           RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQ
Sbjct: 88  RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQ 147

Query: 435 VIEALRRAKFKFPGRQKIYVSKKWG 509
           VIEALRRAKFKFPGRQKIYVSKKWG
Sbjct: 148 VIEALRRAKFKFPGRQKIYVSKKWG 172



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 497 KEVGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQ 631
           K+ GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q
Sbjct: 169 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQ 213


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  183 bits (445), Expect = 2e-46
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +1

Query: 1   RHEARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 180
           R  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSS
Sbjct: 3   RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSS 62

Query: 181 EALEAGRICCNKYLVKXCGKDQFHI 255
           EALEAGRICCNKYLVK CGKDQFHI
Sbjct: 63  EALEAGRICCNKYLVKYCGKDQFHI 87



 Score =  179 bits (435), Expect = 4e-45
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQ 434
           RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQ
Sbjct: 88  RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQ 147

Query: 435 VIEALRRAKFKFPGRQKIYVSKKWG 509
           VIEALRRAKFKFPGRQKIYVSKKWG
Sbjct: 148 VIEALRRAKFKFPGRQKIYVSKKWG 172



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 497 KEVGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQ 631
           K+ GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q
Sbjct: 169 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQ 213


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  183 bits (445), Expect = 2e-46
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +1

Query: 1   RHEARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 180
           R  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSS
Sbjct: 16  RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSS 75

Query: 181 EALEAGRICCNKYLVKXCGKDQFHI 255
           EALEAGRICCNKYLVK CGKDQFHI
Sbjct: 76  EALEAGRICCNKYLVKYCGKDQFHI 100



 Score =  179 bits (435), Expect = 4e-45
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQ 434
           RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQ
Sbjct: 101 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQ 160

Query: 435 VIEALRRAKFKFPGRQKIYVSKKWG 509
           VIEALRRAKFKFPGRQKIYVSKKWG
Sbjct: 161 VIEALRRAKFKFPGRQKIYVSKKWG 185



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 497 KEVGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQ 631
           K+ GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q
Sbjct: 182 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQ 226


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  183 bits (445), Expect = 2e-46
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +1

Query: 1   RHEARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 180
           R  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSS
Sbjct: 22  RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSS 81

Query: 181 EALEAGRICCNKYLVKXCGKDQFHI 255
           EALEAGRICCNKYLVK CGKDQFHI
Sbjct: 82  EALEAGRICCNKYLVKYCGKDQFHI 106



 Score =  179 bits (435), Expect = 4e-45
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQ 434
           RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQ
Sbjct: 107 RMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQ 166

Query: 435 VIEALRRAKFKFPGRQKIYVSKKWG 509
           VIEALRRAKFKFPGRQKIYVSKKWG
Sbjct: 167 VIEALRRAKFKFPGRQKIYVSKKWG 191



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 497 KEVGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQ 631
           K+ GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q
Sbjct: 188 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQ 232


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  157 bits (380), Expect = 2e-38
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = +1

Query: 1   RHEARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSS 180
           R  ARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSS
Sbjct: 9   RRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSS 68

Query: 181 EALEAGRICCNKYL 222
           EALEAGRICCNK L
Sbjct: 69  EALEAGRICCNKML 82



 Score =  153 bits (370), Expect = 3e-37
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +3

Query: 291 NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKF 470
           NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKF
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKF 138

Query: 471 PGRQKIYVSKKWG 509
           PGRQKIYVSKKWG
Sbjct: 139 PGRQKIYVSKKWG 151



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +2

Query: 497 KEVGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQ 631
           K+ GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q
Sbjct: 148 KKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQ 192


>BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p
           protein.
          Length = 1732

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 25/64 (39%), Positives = 30/64 (46%)
 Frame = -2

Query: 196 LPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTGS 17
           L  +P S A  +R+  S  T   R RSL S PN    S   + P  T   +T  FC  G 
Sbjct: 186 LQQRPQSLAWEVRK--SNPTPRVRTRSLCS-PNNSGKSSPALFPG-TQSGETSPFCDNGQ 241

Query: 16  ISPR 5
           ISPR
Sbjct: 242 ISPR 245


>AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-PA
           protein.
          Length = 1732

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 25/64 (39%), Positives = 30/64 (46%)
 Frame = -2

Query: 196 LPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTGS 17
           L  +P S A  +R+  S  T   R RSL S PN    S   + P  T   +T  FC  G 
Sbjct: 186 LQQRPQSLAWEVRK--SNPTPRVRTRSLCS-PNNSGKSSPALFPG-TQSGETSPFCDNGQ 241

Query: 16  ISPR 5
           ISPR
Sbjct: 242 ISPR 245


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 193 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 53
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,636,753
Number of Sequences: 53049
Number of extensions: 734792
Number of successful extensions: 2142
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)