Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0342
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = -1

Query: 443 TLLNLA*LSVSISIPDTVISTCIVLMKRCIKLFAILKYVQCAKLNCTINKQNIARVTFVI 264
           T L+   L+++IS   T+++T +   ++  +L   LK V   K         +  + FV+
Sbjct: 68  TCLDFLLLALNIS---TILTT-VRKQQQWAQLIQNLKVVATTKTKAWFLPFVVTNIIFVL 123

Query: 263 LSLIEGLQWSR 231
               E   W+R
Sbjct: 124 FHTYEAFVWTR 134


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 328 TYFSIANNFIHLFIRTIH 381
           TY+   +N  H+FI  IH
Sbjct: 357 TYYGDLHNMGHVFISYIH 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,326
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)