Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0342
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   1.3  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   2.3  
Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 204  HCHA-CPQIVNIDAPLKSI-HLMRTLHFMYEYSLYLNRSIELYIQGHKIDFDSAKYDEHN 31
            HCH+ C Q  + D    SI HL    +F    S +L  + + Y +GH  D+ + + +E +
Sbjct: 3031 HCHSFCDQSQDSDVNSLSINHLQCVQYFNDIKSCFLEHANQEYFEGHIEDYTTTENEETS 3090

Query: 30   M 28
            +
Sbjct: 3091 L 3091


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 204  HCHA-CPQIVNIDAPLKSI-HLMRTLHFMYEYSLYLNRSIELYIQGHKIDFDSAKYDEHN 31
            HCH+ C Q  + D    SI HL    +F    S +L  + + Y +GH  D+ + + +E +
Sbjct: 3031 HCHSFCDQSQDSDVNSLSINHLQCVQYFNDIKSCFLEHANQEYFEGHIEDYTTTENEETS 3090

Query: 30   M 28
            +
Sbjct: 3091 L 3091


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
            protein C02F4.1 protein.
          Length = 1781

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 156  SIHLMRTLHFMYEYSLYLNRSIELYIQGHKIDFDSAKYDEHNMYVRKV 13
            SI      +F Y    +  +    Y+ GHK  F S K + H  +++++
Sbjct: 1339 SISRTERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRI 1386


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
            C02F4.1 protein.
          Length = 1781

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 156  SIHLMRTLHFMYEYSLYLNRSIELYIQGHKIDFDSAKYDEHNMYVRKV 13
            SI      +F Y    +  +    Y+ GHK  F S K + H  +++++
Sbjct: 1339 SISRTERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRI 1386


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 156  SIHLMRTLHFMYEYSLYLNRSIELYIQGHKIDFDSAKYDEHNMYVRKV 13
            SI      +F Y    +  +    Y+ GHK  F S K + H  +++++
Sbjct: 1339 SISRTERAYFYYYLVAFYGQGFPAYLNGHKFVFRSEKLEMHGEFMQRI 1386


>Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical
           protein K10D11.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 450 ISYFIKSSITIGFYFNSRYSDINVYSSNEKVYKIVCDTKIRSM 322
           +SYF   + T GF+ N + S +    +N K  K++    + SM
Sbjct: 456 VSYFTNGTATNGFFLNFKISSLETKFANFKHPKVILVISVLSM 498


>Z19157-2|CAA79568.1|  826|Caenorhabditis elegans Hypothetical
           protein ZC84.3 protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = +1

Query: 253 INERITKVTRAMFCLLIVQFSFAH*TYFSIANNFIHLFIRTIHVDITVSGIEIETDSYAR 432
           +   + K   +MFC+ +  FS       S   N+IH  ++   ++  +S   I T+S A 
Sbjct: 460 LTPHVEKAICSMFCVNVADFSALISDLDSEQKNWIHQTLQRNGLENGISSNNIATNSGAT 519

Query: 433 FNKVTDSFEFR 465
            ++ T +  F+
Sbjct: 520 ASRETSNTSFQ 530


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,478,551
Number of Sequences: 27780
Number of extensions: 290709
Number of successful extensions: 713
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)