Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0341
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3SBB2 Cluster: Putative uncharacterized protein; n=1; ...    38   0.31 
UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;...    35   1.6  
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ...    35   1.6  
UniRef50_A3SV87 Cluster: Transporter, LysE family protein; n=3; ...    33   6.6  
UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_Q3SBB2 Cluster: Putative uncharacterized protein; n=1;
           uncultured euryarchaeote Alv-FOS5|Rep: Putative
           uncharacterized protein - uncultured euryarchaeote
           Alv-FOS5
          Length = 1736

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 325 NKSINNANPSHTRSILGHTRKPPVKQYSDILT*YPNETDIVFDQNTVMDDNVNIP-INSY 501
           N ++ N N + TR +   T+ P V   S     Y N+T I F  N   DDN+ +  +  Y
Sbjct: 320 NDTVGNTNQTGTRQVTVDTKAPSVTLNSPANDTYTNQTTITF--NCTADDNIKVANVTLY 377

Query: 502 GTF 510
           G F
Sbjct: 378 GNF 380


>UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 445

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
 Frame = -3

Query: 633 ICLSIVDSTSSGLICYGSDLTIGVIYCVDAPFIICSQMDVRECTITINWYVYIIIHHCIL 454
           IC+ I         C    + I +  C+     IC  +DV  CT      + I I  CI 
Sbjct: 125 ICICICSVCVCICTCICICICISICICISVYICICICIDVCICTCVC---ICICISMCIS 181

Query: 453 IKHNVSLVRVLCKYITI---LFYRWFTCVTQYASSVGRICI-IYTFIRL*DCINFYDLFS 286
           I   +S+   +C  I I   ++     C++    +   ICI I T + +  CI+   ++ 
Sbjct: 182 ICICISMCIYICICICISMCIYICICICISMCTYTCICICISICTCVCICICISMC-IYI 240

Query: 285 DVLVVFNDKIRDLCISFCLSNVC 217
            + +  +  I  +CI  C+S +C
Sbjct: 241 SICICISMCIY-ICICICISIIC 262


>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
           n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
           BRCAN2012355 - Homo sapiens (Human)
          Length = 180

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = -3

Query: 594 ICYGSDLTIGVIYCVDAPFIICSQMDVRECTIT-INWYVYIIIHHCILIKHNVSLVRVL- 421
           +C    + + +  C+     +C+ + +  C  T I  Y+Y  IH C+ I   VS+   + 
Sbjct: 67  VCVHIHICVHIYLCMYTHTYMCAHIHM--CVYTYIYVYIYTHIHICVHINMYVSIYVYIY 124

Query: 420 -CKYITILFYRWFTCVTQYASSVGRICI 340
            C  I I  Y  + C   Y  +   ICI
Sbjct: 125 TCIQIYIYMYTLYVCTYTYMCTYIHICI 152


>UniRef50_A3SV87 Cluster: Transporter, LysE family protein; n=3;
           Proteobacteria|Rep: Transporter, LysE family protein -
           Sulfitobacter sp. NAS-14.1
          Length = 209

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = -1

Query: 392 GGLRV*PNMLLVWEGFALFILLLGFEIASTFTIFSVMS*LFSMIK*EIYVFLSVYLTFVE 213
           G  R  P+M+ +  GF + +LL+GF +   F  F V   ++S++K    ++L +YL++  
Sbjct: 45  GFARTVPHMMGITLGFMVMLLLVGFGLIRVFDAFPV---IYSVLKILSLIYL-IYLSYKI 100

Query: 212 TQATP 198
             A P
Sbjct: 101 ATAAP 105


>UniRef50_Q54G05 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1492

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +2

Query: 38  VIDSESKIVEPVFAQEQYQTDKHEIINTTSNAKTLV----IEPIFNHVTEKSKKLMFLAS 205
           ++D + K ++    Q      +HEI N  +N   L     I  I N + EK  K+  L  
Sbjct: 349 IVDDKLKEIQLKDNQLTQLNQQHEIDNNKNNQMILELNDNISKISNQLNEKDNKIQEL-- 406

Query: 206 LASQQTLDKQKEI 244
             S+Q++DKQKEI
Sbjct: 407 --SKQSIDKQKEI 417


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,476,221
Number of Sequences: 1657284
Number of extensions: 12533542
Number of successful extensions: 30642
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30610
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)