Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0341
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    27   0.19 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   5.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 145 HQSLCIRCRIYNFMFVGLVLFLCEYRFNDFTFTIDY 38
           H  LC  C   N +F   ++  C  +FN   F+  Y
Sbjct: 239 HDQLCDMCGAINMLFGFPIIIGCLIQFNTIVFSFCY 274



 Score = 25.4 bits (53), Expect = 0.44
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 145 HQSLCIRCRIYNFMFVGLVLFLCEYRFNDFTFTIDY 38
           H  LC  C   N +F  +++  C  +FN   F   Y
Sbjct: 520 HDKLCDVCDSVNRIFGFIIIIGCLIQFNTIVFAFCY 555


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 95  SGIVPVRIPVQRFYFHYRLR 36
           SG++PVR P+ R   H + R
Sbjct: 360 SGLLPVRPPLTREEIHEKAR 379


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 598 VDLLWIRFDDRRNLLR*CTVYNLFSDGRPGMYHNY 494
           VD L I   ++R L+     Y      RPG+ H Y
Sbjct: 260 VDPLKIPEAEKRKLIHLLQEYRCIFSLRPGLTHKY 294


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 576 LTIGVIYCVDAPFIICSQMDVRECTITINWYVYIIIH 466
           L   ++YC  A F++C  +     +I IN    +IIH
Sbjct: 409 LVTALVYCSLAIFVLCELLIEGTTSILIN-VPSLIIH 444


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 621 IVDSTSSGLICYGSDL 574
           ++D+T  G +CY  DL
Sbjct: 28  VLDATKPGNVCYQRDL 43


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 116 NTTSNAKTLVIEPIFNHVTEKSKKLMFL 199
           N  SNA TLV+    ++++ +++K + L
Sbjct: 263 NLMSNAATLVLNKHIDNISLRARKQVVL 290


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 459 ILIKHNVSLVRVLCKYITILFYR 391
           +L+KHN+ L+  + K I   +Y+
Sbjct: 114 LLLKHNLFLLDNIVKPIIAFYYK 136


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 555 NRLRRSSNRIHNKST 599
           NR R SSN  HN +T
Sbjct: 184 NRRRASSNPCHNGAT 198


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 172 GNMIENWLYHQSLCIRCRIYNFMFVGL 92
           GN  E  +Y +  C  CR+   + VG+
Sbjct: 227 GNNCEIDMYMRRKCQECRLKKCLSVGM 253


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 92  GIVPVRIPVQRFY 54
           G+ PV+  VQ+FY
Sbjct: 92  GLAPVKFYVQKFY 104


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory
          receptor candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 92 GIVPVRIPVQRFY 54
          G+ PV+  VQ+FY
Sbjct: 18 GLAPVKFYVQKFY 30


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 115 YNFMFVGLVLFLCEYRFNDFT 53
           YN +FV L+     YRF   T
Sbjct: 227 YNDLFVMLISTALAYRFGQIT 247


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 115 YNFMFVGLVLFLCEYRFNDFT 53
           YN +FV L+     YRF   T
Sbjct: 227 YNDLFVMLISTALAYRFGQIT 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,617
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)