Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0338
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.1  
AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding pr...    23   9.1  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    23   9.1  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   9.1  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 556 VEYSKLIEIKFQLLHESMKSCCYEK 482
           +   K  +IK + LH  +KS  Y+K
Sbjct: 103 IHNQKSADIKHRALHNEIKSLLYQK 127


>AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP6 protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 481 FFHSNRISWIHVIIGTLFLL 540
           F+ SN ++W+  +IG   L+
Sbjct: 6   FYSSNTVTWVVAVIGVYCLV 25


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 481 FFHSNRISWIHVIIGTLFLL 540
           F+ SN ++W+  +IG   L+
Sbjct: 6   FYSSNTVTWVVAVIGVYCLV 25


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 392 ILLGFYFTILQAYEYIEASFTIADRIYGSTFF 487
           +++  YFT+L     +  SF + +R    TFF
Sbjct: 58  LIINGYFTVLYFNLVLRTSFLVINRRKFETFF 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,137
Number of Sequences: 2352
Number of extensions: 8926
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)