Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0333
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 23 1.8
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 3.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 3.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 3.1
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 3.1
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 22 5.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.4
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 481 WFTGLMYADNVRFFPHRGKDTVRDS 407
W + + VRF PH G+ V DS
Sbjct: 477 WVSAMSRPFEVRFNPHTGRVEVLDS 501
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 120 DDDEKAELLADTLQTQCTPSTQ 185
D E LAD LQT C+ +Q
Sbjct: 57 DGQELKNNLADALQTSCSKCSQ 78
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 566 ETSSHPRAFSSMNNSDSVQITHGVQQVHRLHGG 664
+ S+ ++ +NSD Q H V Q H GG
Sbjct: 38 DQSAAAASWHDFDNSDFFQSEHAVIQTHPSIGG 70
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 566 ETSSHPRAFSSMNNSDSVQITHGVQQVHRLHGG 664
+ S+ ++ +NSD Q H V Q H GG
Sbjct: 38 DQSAAAASWHDFDNSDFFQSEHAVIQTHPSIGG 70
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 120 DDDEKAELLADTLQTQCTPSTQ 185
D E LAD LQT C+ +Q
Sbjct: 57 DGQELKNNLADALQTSCSKCSQ 78
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 431 AVWKEADVIGIHKPG 475
AV++ ++G+H+PG
Sbjct: 192 AVYEPVRIMGVHRPG 206
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 443 EADVIGIHKPGKPKNHPTSYRPL 511
++DV+ + KPG P + PL
Sbjct: 220 DSDVVNLSKPGTPPSGEPGNGPL 242
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSSQSSNPPQ 199
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 126 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 155
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 551 STNASETSSHPRAFSSMNNSDSVQITHGVQ 640
+++ S TSS +A ++ NNS S Q ++ Q
Sbjct: 170 ASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,783
Number of Sequences: 336
Number of extensions: 3275
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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