Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0333
(684 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 83 3e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 6e-15
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 78 1e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 78 1e-14
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 77 3e-14
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 77 3e-14
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 77 3e-14
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 77 3e-14
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 77 3e-14
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 76 4e-14
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 76 5e-14
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 72 6e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 72 6e-13
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 70 3e-12
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 70 3e-12
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 64 1e-10
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 60 2e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 59 6e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 55 8e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 53 3e-07
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 41 0.001
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.004
AY121617-1|AAM51944.1| 620|Drosophila melanogaster GH03958p pro... 29 5.9
AJ884593-1|CAI56426.1| 456|Drosophila melanogaster G-protein co... 29 5.9
AJ276682-1|CAB93141.1| 620|Drosophila melanogaster 15,15' beta ... 29 5.9
AE014297-1742|AAF54978.1| 620|Drosophila melanogaster CG9347-PA... 29 5.9
AB041507-1|BAA94508.1| 620|Drosophila melanogaster DRPE65 protein. 29 5.9
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 83.4 bits (197), Expect = 3e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 260 LPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVW 439
+ P+ E+ + IK L +K+PG D + N +K LPV+ I+ LA I+NA + FP W
Sbjct: 434 IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQW 493
Query: 440 KEADVIGIHKPGKPKNHPTSYRPLA 514
K A ++ IHKPGKP+ P SYRP++
Sbjct: 494 KMAAILMIHKPGKPEESPESYRPIS 518
Score = 55.2 bits (127), Expect = 8e-08
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 481 KKSSDELPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNHS 630
++S + P+SLL SL KL+ERLI RL D ++ + IL D QFGFR HS
Sbjct: 508 EESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHS 557
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 79.0 bits (186), Expect = 6e-15
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 ALPP--VTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFP 430
+LPP VT EVK+LI L +KAPG D + NR I+LLP Q + L IFN+ + FP
Sbjct: 234 SLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFP 293
Query: 431 AVWKEADVIGIHKPGKPKNHPTSYRPLA 514
WK A +I IHK GK SYRP++
Sbjct: 294 KAWKSASIIMIHKTGKTPTDVDSYRPIS 321
Score = 39.1 bits (87), Expect = 0.006
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1
Query: 478 TKKSSDELPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
T D P+SLL SLGK+ ERLI RL + QFGFR H
Sbjct: 310 TPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQH 359
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 539
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 540 AQVKMILKPGKSANEPRSYRPIS 562
Score = 37.9 bits (84), Expect = 0.013
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 560 PISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEH 600
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 77.8 bits (183), Expect = 1e-14
Identities = 41/83 (49%), Positives = 49/83 (59%)
Frame = +2
Query: 260 LPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVW 439
L VT EVK+LI L +KAPG D + NR I+LLP Q + LA IFN+ + FP W
Sbjct: 435 LSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAW 494
Query: 440 KEADVIGIHKPGKPKNHPTSYRP 508
K A +I IHK GK SYRP
Sbjct: 495 KSASIIMIHKTGKTPTDVDSYRP 517
Score = 37.9 bits (84), Expect = 0.013
Identities = 22/50 (44%), Positives = 24/50 (48%)
Frame = +1
Query: 478 TKKSSDELPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
T D P SLL SLGK+ ERLI RL + QFGFR H
Sbjct: 508 TPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQH 557
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 364 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 423
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 424 AQVKMILKPGKSVNDPKSYRPIS 446
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 444 PISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 484
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPIS 562
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 560 PISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPIS 562
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 560 PISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 442 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 501
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 502 AQVKMILKPGKSVNDPKSYRPIS 524
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 522 PISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 562
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 76.6 bits (180), Expect = 3e-14
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ D IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 480 PITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKH 539
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 540 AQVKMILKPGKSVNDPKSYRPIS 562
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 560 PISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 76.2 bits (179), Expect = 4e-14
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
P+T E+ + IK+L+ KAPG D I+N++IK LP + + L I+N+ + +P WK
Sbjct: 492 PITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKH 551
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A V I KPGK N P SYRP++
Sbjct: 552 AQVKMILKPGKSSNEPKSYRPIS 574
Score = 37.9 bits (84), Expect = 0.013
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 484 KSSDE---LPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
KSS+E P+SLL L K++ERL+ KRL K + QFGFR H
Sbjct: 562 KSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 612
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 75.8 bits (178), Expect = 5e-14
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +2
Query: 260 LPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVW 439
+ P P EV ++I KAPG D I N +K LP Q I+ + +FNA + FP W
Sbjct: 433 ITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQW 492
Query: 440 KEADVIGIHKPGKPKNHPTSYRPLA 514
K + IHKPGKP+ P SYRP++
Sbjct: 493 KLGIISMIHKPGKPEREPASYRPIS 517
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL S+ K++ERLI R+ + ++GI + QFGFR H
Sbjct: 515 PISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGH 555
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 72.1 bits (169), Expect = 6e-13
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +2
Query: 269 VTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKEA 448
VT EV ++K L RK+PG DGI N +K LP I + +I N + FP WK A
Sbjct: 461 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 520
Query: 449 DVIGIHKPGKPKNHPTSYRPLA 514
++ I KPGKP ++P SYRP++
Sbjct: 521 KIVPILKPGKPPDNPESYRPIS 542
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFR 618
P+SLL L K+ E+LI RL F+ L Q+GFR
Sbjct: 540 PISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFR 577
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 72.1 bits (169), Expect = 6e-13
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +2
Query: 269 VTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKEA 448
VT EV ++K L RK+PG DGI N +K LP I + +I N + FP WK A
Sbjct: 409 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 468
Query: 449 DVIGIHKPGKPKNHPTSYRPLA 514
++ I KPGKP ++P SYRP++
Sbjct: 469 KIVPILKPGKPPDNPESYRPIS 490
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFR 618
P+SLL L K+ E+LI RL F+ L Q+GFR
Sbjct: 488 PISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFR 525
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 70.1 bits (164), Expect = 3e-12
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = +2
Query: 239 LLATLDALPPVT--PMEVKDLIKD-LRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAA 409
+ A LD P P E+ +IK+ L PRK+PG D I+ R++ LP I+ + +FNA
Sbjct: 419 IAANLDPQEPFEFRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAI 478
Query: 410 IANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPLA-SSCL 526
FP WK++ ++ I KPGK K P+SYRP++ +CL
Sbjct: 479 AKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCL 518
Score = 36.3 bits (80), Expect = 0.039
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL+E+++ R+ + L QFGFR H
Sbjct: 511 PISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKH 551
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 70.1 bits (164), Expect = 3e-12
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = +2
Query: 239 LLATLDALPPVT--PMEVKDLIKD-LRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAA 409
+ A LD P P E+ +IK+ L PRK+PG D I+ R++ LP I+ + +FNA
Sbjct: 419 IAANLDPQEPFEFRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAI 478
Query: 410 IANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPLA-SSCL 526
FP WK++ ++ I KPGK K P+SYRP++ +CL
Sbjct: 479 AKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCL 518
Score = 36.3 bits (80), Expect = 0.039
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL+E+++ R+ + L QFGFR H
Sbjct: 511 PISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKH 551
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 64.5 bits (150), Expect = 1e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
PVT E+ LI L +KAPG+D ++N+ I LP + + L I+N + FP WK
Sbjct: 36 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 95
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A + I KPGK SYRP++
Sbjct: 96 ASISMIPKPGKSPFALNSYRPIS 118
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL ER++ KRL D S + QFGFR +H
Sbjct: 116 PISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 156
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.5 bits (150), Expect = 1e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
PVT E+ LI L +KAPG+D ++N+ I LP + + L I+N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A + I KPGK SYRP++
Sbjct: 543 ASISMIPKPGKSPFALNSYRPIS 565
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL ER++ KRL D S + QFGFR +H
Sbjct: 563 PISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDH 603
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.5 bits (150), Expect = 1e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
PVT E+ LI L +KAPG+D ++N+ I LP + + L I+N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A + I KPGK SYRP++
Sbjct: 543 ASISMIPKPGKSPFALNSYRPIS 565
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL ER++ KRL D S + QFGFR +H
Sbjct: 563 PISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 603
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.5 bits (150), Expect = 1e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 266 PVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKE 445
PVT E+ LI L +KAPG+D ++N+ I LP + + L I+N + FP WK
Sbjct: 483 PVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKH 542
Query: 446 ADVIGIHKPGKPKNHPTSYRPLA 514
A + I KPGK SYRP++
Sbjct: 543 ASISMIPKPGKSPFALNSYRPIS 565
Score = 41.9 bits (94), Expect = 8e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL L KL ER++ KRL D S + QFGFR +H
Sbjct: 563 PISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 603
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 60.5 bits (140), Expect = 2e-09
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 275 PMEVKDLIKD-LRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKEAD 451
P E+ +IKD L P+K+PG D I+ +I LP + + +FNA FP WK
Sbjct: 435 PKEITKIIKDNLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMK 494
Query: 452 VIGIHKPGKPKNHPTSYRPLA-SSCL 526
+I I KPGK +SYRP++ SC+
Sbjct: 495 IIMIPKPGKNHTVASSYRPISLLSCI 520
Score = 35.9 bits (79), Expect = 0.052
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
P+SLL + KL+E+ + RL + I+ QFGFR +H
Sbjct: 513 PISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESH 553
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 58.8 bits (136), Expect = 6e-09
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +2
Query: 263 PPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWK 442
P +T EV + K +RP KAPG DGI ++K + F + + +FP WK
Sbjct: 400 PCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWK 459
Query: 443 EADVIGIHKPGKPKNHPTSYRPL 511
+ ++ + K P N P SYRPL
Sbjct: 460 KMKLVLLLKGKGPANVPRSYRPL 482
Score = 35.5 bits (78), Expect = 0.068
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNHS 630
P+ LL +GKL+ER++Y R+ S L +Q+GFR S
Sbjct: 481 PLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKS 522
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 55.2 bits (127), Expect = 8e-08
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 272 TPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKEAD 451
T +E+++ + + K+PG+D +S ++K L L L IFN + +P W+ A
Sbjct: 438 TLLEIENSVAKAKG-KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAI 496
Query: 452 VIGIHKPGKPKNHPTSYRPLA-SSCL 526
+I I KP KP + SYRP++ SCL
Sbjct: 497 IIPISKPNKPPSDINSYRPISLLSCL 522
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 505 PVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNHS 630
P+SLL LGK E++I +RL F+ ++ Q F++NHS
Sbjct: 515 PISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHS 556
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 53.2 bits (122), Expect = 3e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 245 ATLDALPPVTPM-EVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANC 421
A + +PP + EV + L+ R++PG DGI+ + K + + LAS+F+ I
Sbjct: 425 AIAEEVPPALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLG 484
Query: 422 IFPAVWKEADVIGIHK-PGKPKNHPTSYR 505
FPA WK V+ + K P K K P+SYR
Sbjct: 485 YFPAEWKCPRVVSLLKGPDKDKCEPSSYR 513
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 362 LPVQLIVMLASIFNAAIANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPLA-SSCL 526
LP+ ++ + +FNA FP WK++ +I I KP K K P SYRP++ +CL
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCL 59
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 484 KSSDELPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNH 627
K+ P+SLL L KL+E+ + R+ + + L QF F H
Sbjct: 45 KTQPSYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDFPAKH 92
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 269 VTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAIANCIFPAVWKEA 448
+T +E+ ++ L+ APG + IS ++IK + +FN I N P +K +
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIKNSSHTTKNRITKLFNE-IFNSHIPQAYKTS 490
Query: 449 DVIGIHKPGKPKNHPTSYRPLASSC 523
+I I KP K +SYRP++ +C
Sbjct: 491 LIIPILKPNTDKTKTSSYRPISLNC 515
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 481 KKSSDELPPVSLLMSLGKLYERLIYKRLRDFVSSKGILIDEQFGFRTNHS 630
K + P+SL + K+ +++I KRL V+ ++ D+QFGF+ S
Sbjct: 502 KTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS 551
>AY121617-1|AAM51944.1| 620|Drosophila melanogaster GH03958p
protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 414 AIAALKIDANITMSWTGRSLITRLDIPSEPGALRGRRSLIKSLTSIGVTGGNASRVAR 241
AIA ++ + N + GR L L + + P A +R L+KS + G++ SR +
Sbjct: 368 AIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMK 425
>AJ884593-1|CAI56426.1| 456|Drosophila melanogaster G-protein
coupled octopamine receptorprotein.
Length = 456
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 476 KPKNHPTSYRPLASSCL*ANCMSV*STNASETSSHPRAFSSMNNSDS 616
K PTS P+ S + A+ S+ T S +S+ FSS ++SDS
Sbjct: 56 KTTTTPTSSLPITSQFVDASLTSLSLTATSSDASYSSPFSSYSSSDS 102
>AJ276682-1|CAB93141.1| 620|Drosophila melanogaster 15,15' beta
carotene dioxygenase protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 414 AIAALKIDANITMSWTGRSLITRLDIPSEPGALRGRRSLIKSLTSIGVTGGNASRVAR 241
AIA ++ + N + GR L L + + P A +R L+KS + G++ SR +
Sbjct: 368 AIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMK 425
>AE014297-1742|AAF54978.1| 620|Drosophila melanogaster CG9347-PA
protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 414 AIAALKIDANITMSWTGRSLITRLDIPSEPGALRGRRSLIKSLTSIGVTGGNASRVAR 241
AIA ++ + N + GR L L + + P A +R L+KS + G++ SR +
Sbjct: 368 AIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMK 425
>AB041507-1|BAA94508.1| 620|Drosophila melanogaster DRPE65 protein.
Length = 620
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 414 AIAALKIDANITMSWTGRSLITRLDIPSEPGALRGRRSLIKSLTSIGVTGGNASRVAR 241
AIA ++ + N + GR L L + + P A +R L+KS + G++ SR +
Sbjct: 368 AIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMK 425
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,617,644
Number of Sequences: 53049
Number of extensions: 701119
Number of successful extensions: 1815
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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