Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0332
(692 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 44 2e-06
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 40 3e-05
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 3.1
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 21 7.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 7.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 9.6
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 9.6
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Frame = +3
Query: 255 FLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIY 434
FL PK DE G P+ D + F ELD F + GQ+ ITR+S+ + ++P +
Sbjct: 503 FLAPKTDERGNPWLFRDQKIMFIELDKFTVNLKQGQNTITRASSQSSV----TIPFERTF 558
Query: 435 KLLD----QGKIPTDMFNSSDTMPSRLMLLRVHTMDSPSSCLYSSIRMKPRPKESEPIQV 602
+ LD QG FN + ML+ T + S L+ I K + +
Sbjct: 559 RNLDLNRPQGGEELAQFNFCGCGWPQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEG 618
Query: 603 CCSGA 617
C+ A
Sbjct: 619 VCNDA 623
Score = 28.7 bits (61), Expect = 0.048
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 16 YTQEALHFVGLKISDVKVDKMVTFFDHFD-FDAFNTVYFSKEELKSSPHGYK-VRQPRLN 189
YT+ L++ G+ +S+++V + + F+ F + V S+ + P G VR L
Sbjct: 420 YTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDVDLSRG-MDFQPRGSVFVRFTHLQ 478
Query: 190 HKPFTVTIDIKSDVXTN 240
H+PFT I + + N
Sbjct: 479 HQPFTYKITVNNQSNGN 495
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 39.5 bits (88), Expect = 3e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +3
Query: 255 FLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMAEIY 434
FL P++DE G P+ + F ELD F + G + ITR ST+ + ++P +
Sbjct: 502 FLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQGTNTITRHSTESSL----TIPFERTF 557
Query: 435 KLLDQGKIPT 464
+ LD + PT
Sbjct: 558 RNLDANR-PT 566
Score = 25.4 bits (53), Expect = 0.44
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 509 PKGTYDGFPFQLFVFVYPY 565
PKGT G+P LFV + Y
Sbjct: 588 PKGTEAGYPCHLFVMISNY 606
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 160 GYKVRQPRLNHKPFTVTI 213
G K P LNHKP +TI
Sbjct: 253 GPKQELPDLNHKPLNLTI 270
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 160 GYKVRQPRLNHKPFTVTI 213
G K P LNHKP +TI
Sbjct: 145 GPKQELPDLNHKPLNLTI 162
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 409 SSLKNAKSVDERVI*DWP 356
S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 510 LRVHTMDSPSSCLY 551
+R HT + P SC Y
Sbjct: 27 IRTHTGEKPFSCTY 40
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 349 LTLASLR*RVHLLTLHSSKKTLYRWPKSTSSWTKERFLLTCSTPRT 486
+ L++ R + T H + K + + T SWT+ S P+T
Sbjct: 30 IDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFANVSPPKT 75
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 9.6
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -1
Query: 500 PRRHSVRG---VEHVSRNLSLVQELVDFGHR*RVF 405
P +RG V H N S VQ+L GH VF
Sbjct: 214 PNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVF 248
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.6
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = -1
Query: 500 PRRHSVRG---VEHVSRNLSLVQELVDFGHR*RVF 405
P +RG V H N S VQ+L GH VF
Sbjct: 221 PNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVF 255
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,340
Number of Sequences: 336
Number of extensions: 3190
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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