Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0331
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    69   4e-14
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    69   4e-14
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    68   6e-14
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    68   6e-14
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    29   0.036
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.5  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 68.9 bits (161), Expect = 4e-14
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = +1

Query: 289 YRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 462
           Y F   WLG GLL S G KW++ RK++ P FH N+L+ FI +FN  ++ +V+ L+ E+
Sbjct: 104 YHFLHSWLGTGLLTSRGPKWQNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLEAES 161


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 68.9 bits (161), Expect = 4e-14
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +1

Query: 289 YRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKE 459
           Y F   WLG GLL S G KW++ RK++ P FH N+L+ FI +FN  ++ +V+ L+ E
Sbjct: 104 YHFLHSWLGTGLLTSAGPKWQNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLEAE 160


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 68.1 bits (159), Expect = 6e-14
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = +1

Query: 268 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 447
           +++K+  Y     WLG GLL STG KW++ RK++ P FH ++L+ F+ +FN  +  +V+ 
Sbjct: 104 HMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEV 163

Query: 448 LKKE 459
           LK+E
Sbjct: 164 LKEE 167


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 68.1 bits (159), Expect = 6e-14
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = +1

Query: 268 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 447
           +++K+  Y     WLG GLL STG KW++ RK++ P FH ++L+ F+ +FN  +  +V+ 
Sbjct: 104 HMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEV 163

Query: 448 LKKE 459
           LK+E
Sbjct: 164 LKEE 167


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 14/70 (20%), Positives = 31/70 (44%)
 Frame = +1

Query: 301 KPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCH 480
           +P L   L    G+KW+  R  ++P F  + +K+   L +  +   VD  +    + +  
Sbjct: 69  EPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVDFFQGREQDVEIK 128

Query: 481 DYMSECTVEI 510
           +  S  + ++
Sbjct: 129 EVFSRFSNDV 138


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 15/63 (23%), Positives = 24/63 (38%)
 Frame = +1

Query: 322 LLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYMSECT 501
           L IS    WR+ R  ++P F    +K    L       +   L+      D    M + +
Sbjct: 115 LFISKDAVWRNLRTKLSPVFTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYS 174

Query: 502 VEI 510
           V+I
Sbjct: 175 VDI 177



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 345 FLTSTDKKTVSEPWFEETVFLSFIDVNVTTRMTSTSRGSYR 223
           +L +  K T+ E   ++ +   FID+    R T T   SY+
Sbjct: 241 YLINVFKTTLQEREKKKIIRNDFIDLLSNLRKTETITDSYK 281


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 153 FRKALTTITNPSLRSG 200
           FR+ L    NPSLR G
Sbjct: 23  FRRGLRLHDNPSLREG 38


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 547 CVLLLTPIAVSSKFQPCTRSCSHG 476
           C +  T ++  SK     R C+HG
Sbjct: 455 CSVYYTCVSDGSKLVSIQRKCNHG 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,276
Number of Sequences: 336
Number of extensions: 3376
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)