Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0331
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26710.1 68415.m03204 cytochrome P450, putative 50 1e-06
At3g14680.1 68416.m01857 cytochrome P450, putative similar to GB... 47 1e-05
At3g14650.1 68416.m01854 cytochrome P450, putative similar to GB... 45 4e-05
At3g14660.1 68416.m01855 cytochrome P450, putative similar to GB... 44 1e-04
At3g14620.1 68416.m01851 cytochrome P450, putative similar to GB... 44 1e-04
At2g45510.1 68415.m05660 cytochrome P450, putative 44 1e-04
At2g44890.1 68415.m05588 cytochrome P450 family protein contains... 44 1e-04
At3g14690.1 68416.m01858 cytochrome P450, putative similar to GB... 43 2e-04
At1g17060.1 68414.m02075 cytochrome P450, putative 41% identical... 43 2e-04
At3g14640.1 68416.m01853 cytochrome P450, putative similar to GB... 42 5e-04
At3g14610.1 68416.m01850 cytochrome P450, putative similar to GB... 41 9e-04
At5g38450.1 68418.m04648 cytochrome P450 family protein similar ... 39 0.003
At3g14630.1 68416.m01852 cytochrome P450, putative similar to GB... 39 0.003
At1g67110.1 68414.m07635 cytochrome P450, putative similar to Cy... 38 0.005
At1g31800.1 68414.m03903 cytochrome P450 family protein similar ... 38 0.006
At5g24910.1 68418.m02949 cytochrome P450 family protein similar ... 37 0.014
At4g15110.1 68417.m02322 cytochrome P450 97B3, putative (CYP97B3... 36 0.019
At2g46950.1 68415.m05864 cytochrome P450 family protein similar ... 33 0.18
At5g52400.1 68418.m06501 cytochrome P450 family protein similar ... 31 0.72
At4g27710.1 68417.m03983 cytochrome P450 family protein contains... 31 0.72
At5g63450.1 68418.m07965 cytochrome P450, putative 30 1.3
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ... 29 3.8
At2g46960.2 68415.m05866 cytochrome P450 family protein similar ... 29 3.8
At2g46960.1 68415.m05865 cytochrome P450 family protein similar ... 29 3.8
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 29 3.8
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa... 29 3.8
At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase fa... 28 5.1
At3g04460.1 68416.m00473 Pex2/Pex12 N-terminal domain-containing... 28 5.1
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 28 6.7
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 28 6.7
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 27 8.9
At1g63710.1 68414.m07210 cytochrome P450, putative similar to cy... 27 8.9
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 27 8.9
>At2g26710.1 68415.m03204 cytochrome P450, putative
Length = 520
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 268 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 447
+ +K E + K G+GLL G+KW HRK+I+PTFH+ LK + + + +VDK
Sbjct: 126 FYEKNEAHPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLVPVVLKSVTDMVDK 185
Query: 448 LKKEAS 465
+ S
Sbjct: 186 WSDKLS 191
>At3g14680.1 68416.m01857 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 489
LG GL+ G KW HR++I P FHL +K+ + +F+ + +V + K S D
Sbjct: 136 LGTGLVSYDGDKWAQHRRIINPAFHLEKIKNMVHVFHESCSELVGEWDKLVS-----DKG 190
Query: 490 SECTVEIY 513
S C V+++
Sbjct: 191 SSCEVDVW 198
>At3g14650.1 68416.m01854 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 489
+ G+L G KW HR++I P FHL +K+ + F+ + +V K K S D
Sbjct: 136 IATGVLSYDGDKWAKHRRIINPAFHLEKIKNMVPAFHQSCSEIVCKWDKLVS-----DKE 190
Query: 490 SECTVEIY 513
S C V+++
Sbjct: 191 SSCEVDVW 198
>At3g14660.1 68416.m01855 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 319 GLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYMSEC 498
GL+ G KW HR++I P FHL +K+ + F+ + +V + K + D S C
Sbjct: 139 GLVSYDGDKWTKHRRIINPAFHLEKIKNMVPAFHQSCSEIVGEWDKLVT-----DKQSSC 193
Query: 499 TVEIY 513
V+I+
Sbjct: 194 EVDIW 198
>At3g14620.1 68416.m01851 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 515
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +1
Query: 319 GLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKK------EASNFDCH 480
G+ + G+KW HRK+I P+FHL LK I F + ++ K +K ++ D
Sbjct: 143 GVALYEGEKWSKHRKIINPSFHLEKLKIMIPAFYESCSEMISKWEKLVTEQGSSNEIDVW 202
Query: 481 DYMSECTVEI 510
Y+ + T ++
Sbjct: 203 PYLGDLTSDV 212
>At2g45510.1 68415.m05660 cytochrome P450, putative
Length = 511
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSF-IDLFNANSRAVVDKLKKEASN---FDC 477
LG+G+ G+KWR RKL + F VL+ F +F N+ +V + + A + FD
Sbjct: 114 LGHGIFAVDGEKWRQQRKLSSFEFSTRVLRDFSCSVFRRNASKLVGFVSEFALSGKAFDA 173
Query: 478 HDYMSECTVEIYWKL 522
D + CT++ +K+
Sbjct: 174 QDLLMRCTLDSIFKV 188
>At2g44890.1 68415.m05588 cytochrome P450 family protein contains
Pfam PF00067: Cytochrome P450; similar to Cytochrome
P450 86A2 (SP:O23066) [Arabidopsis thaliana]
Length = 505
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSF-IDLFNANSRAVVDKLKKEA---SNFDC 477
LG+G+ G+KW+ RKL++ F VL++F +F ++ +V + + A +FD
Sbjct: 108 LGHGIFAVDGEKWKQQRKLVSFEFSTRVLRNFSYSVFRTSASKLVGFIAEFALSGKSFDF 167
Query: 478 HDYMSECTVEIYWKL 522
D + +CT++ +K+
Sbjct: 168 QDMLMKCTLDSIFKV 182
>At3g14690.1 68416.m01858 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 489
+ GL G KW HR++I P FH+ +K+ + F+ + R VV + + S D
Sbjct: 136 IAKGLANYDGDKWAKHRRIINPAFHIEKIKNMVPAFHQSCREVVGEWDQLVS-----DKG 190
Query: 490 SECTVEIY 513
S C V+++
Sbjct: 191 SSCEVDVW 198
>At1g17060.1 68414.m02075 cytochrome P450, putative 41% identical to
Cytochrome P450 [Catharanthus roseus] (gi|404690)
Length = 476
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 316 NGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEAS 465
+GLL G KW HR ++ P F ++ LKS + FN++ + ++++ ++ AS
Sbjct: 140 SGLLNHEGPKWSKHRSILNPAFRIDNLKSILPAFNSSCKEMLEEWERLAS 189
>At3g14640.1 68416.m01853 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 514
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 489
+ G++ G KW HR++I P FH+ +K+ + F+ + VV + K S+
Sbjct: 136 IATGIINYDGDKWAKHRRIINPAFHIEKIKNMVPAFHQSCSDVVGEWSKLVSD----KGS 191
Query: 490 SECTVEIY 513
S C V+++
Sbjct: 192 SSCEVDVW 199
>At3g14610.1 68416.m01850 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 512
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLF 417
L GL G KW SHR++I P FHL +K+ I F
Sbjct: 135 LAGGLASYKGDKWASHRRIINPAFHLEKIKNMIPAF 170
>At5g38450.1 68418.m04648 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]
Length = 518
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 301 KPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKE----ASN 468
K ++G GLL++ GQ W R L AP F LK + + +V++L+KE A+
Sbjct: 137 KNFIGRGLLMANGQDWHHQRHLAAPAFTGERLKGYARHMVECTSKLVERLRKEVGEGANE 196
Query: 469 FDCHDYMSECTVEI 510
+ + M + T +I
Sbjct: 197 VEIGEEMHKLTADI 210
>At3g14630.1 68416.m01852 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 508
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 489
L +GL + G KW HRK+I P FH +K+ + F + V+ + +K S D
Sbjct: 132 LTDGLANADGDKWVKHRKIINPAFHFEKIKNMVPTFYKSCIEVMCEWEKLVS-----DKG 186
Query: 490 SECTVEIY 513
S C ++++
Sbjct: 187 SSCELDVW 194
>At1g67110.1 68414.m07635 cytochrome P450, putative similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
Length = 512
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 301 KPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKE-ASNFDC 477
K ++G GLL++ G+ W R + AP F + LK + ++ + ++L+KE +
Sbjct: 138 KGFIGRGLLMANGEAWHHQRHMAAPAFTRDRLKGYAKHMVECTKMMAERLRKEVGEEVEI 197
Query: 478 HDYMSECTVEI 510
+ M T +I
Sbjct: 198 GEEMRRLTADI 208
>At1g31800.1 68414.m03903 cytochrome P450 family protein similar to
Cytochrome P450 97B2 (SP:048921) [Glycine max]; contains
Pfam profile: PF00067: Cytochrome P450
Length = 595
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA---SNFDCH 480
+G GL+ + G+ WR R+ I P H + + I LF S + KL A +
Sbjct: 185 MGKGLIPADGEIWRRRRRAIVPALHQKYVAAMISLFGEASDRLCQKLDAAALKGEEVEME 244
Query: 481 DYMSECTVEIYWKLLW 528
S T++I K ++
Sbjct: 245 SLFSRLTLDIIGKAVF 260
>At5g24910.1 68418.m02949 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
similar to fatty acid omega-hydroxylase cytochrome P450
4A11 - Homo sapiens, PIR:I53015; supported by cDNA:
gi_16604323_gb_AY058060.1_
Length = 532
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 301 KPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 447
K LG G++ S G W R++IAP F L+ +K + L ++ ++ K
Sbjct: 145 KSILGRGVITSNGPHWAHQRRIIAPEFFLDKVKGMVGLVVESAMPMLSK 193
>At4g15110.1 68417.m02322 cytochrome P450 97B3, putative (CYP97B3)
identical to Cytochrome P450 97B3 (SP:O23365)
[Arabidopsis thaliana]
Length = 580
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 274 DKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK 453
DK +P +G GL+ + W+ R+ I P FH L++ + +F+ S ++ K +
Sbjct: 144 DKGVLAEILEPIMGKGLIPADLDTWKLRRRAITPAFHKLYLEAMVKVFSDCSEKMILKSE 203
Query: 454 K 456
K
Sbjct: 204 K 204
>At2g46950.1 68415.m05864 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450
Length = 572
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 313 GNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDL 414
GNGL+ G W HR+++ P F ++ LK L
Sbjct: 196 GNGLIFVNGLDWVRHRRILNPAFSMDKLKLMTQL 229
>At5g52400.1 68418.m06501 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) (cytochrome P450 lxxii
hydroxylase) (ge10h) [Catharanthus roseus]
Length = 519
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 301 KPWLGNGLLISTGQKWRSHRKLIAPTF 381
+P G GL++ G W HR +I P F
Sbjct: 146 EPMFGTGLVMVEGDDWTRHRHIITPAF 172
>At4g27710.1 68417.m03983 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 518
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 313 GNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASN 468
G GL G W HR+++ P F ++ LK+ + + ++ +K+ N
Sbjct: 141 GKGLSFIQGDDWIRHRRILNPAFSMDRLKAMTQPMGDCTLRIFEEWRKQRRN 192
>At5g63450.1 68418.m07965 cytochrome P450, putative
Length = 510
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSF 405
LG G+ S G+ W S RKL + F + L+ F
Sbjct: 117 LGGGIFNSDGELWSSQRKLASHEFTMRSLREF 148
>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
Cytochrome P450 94A1 (P450-dependent fatty acid
omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
Pfam profile: PF00067 cytochrome P450
Length = 506
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 310 LGNGLLISTGQKWRSHRKLIAPTFHLNVLKSF 405
LG G+ G W S RKL + F L+SF
Sbjct: 115 LGGGIFNVDGHSWSSQRKLASHEFSTRSLRSF 146
>At2g46960.2 68415.m05866 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450;
supported by cDNA: gi_13605860_gb_AF367329.1_AF367329
Length = 519
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 319 GLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEAS 465
GL+ G W HR+++ P F ++ LK + + ++++ +KE++
Sbjct: 142 GLVFIEGADWVRHRRILNPAFSIDRLKIMTTVMVDCTLKMLEEWRKEST 190
>At2g46960.1 68415.m05865 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450;
supported by cDNA: gi_13605860_gb_AF367329.1_AF367329
Length = 403
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 319 GLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEAS 465
GL+ G W HR+++ P F ++ LK + + ++++ +KE++
Sbjct: 26 GLVFIEGADWVRHRRILNPAFSIDRLKIMTTVMVDCTLKMLEEWRKEST 74
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 277 KAEEYR-FFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSF 405
K E Y + + LG+G+ S G+ WR RK + F L+ F
Sbjct: 46 KGETYHSYMEVLLGDGIFNSDGELWRKQRKTASFEFASKNLRDF 89
>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) (Chromaffin granule ATPase) from
{Homo sapiens} SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos
taurus} SP|Q29449; contains InterPro accession IPR005834:
Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
gb|AA394473 come from this gene
Length = 1203
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 600 YFTW-RHTKIWAATGFVNLNLQIYG 671
YFTW +H IW + F + L IYG
Sbjct: 1067 YFTWLQHIVIWGSVAFWYIFLMIYG 1091
>At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase family
protein similar to Potential phospholipid-transporting
ATPase (EC 3.6.3.1) from Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like hydrolase
Length = 1202
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 600 YFTW-RHTKIWAATGFVNLNLQIYG 671
YFTW +H IW + F + L IYG
Sbjct: 1066 YFTWVQHIVIWGSIAFWYIFLMIYG 1090
>At3g04460.1 68416.m00473 Pex2/Pex12 N-terminal domain-containing
protein similar to SP|O00623 Peroxisome assembly protein
12 (Peroxin-12) (Peroxisome assembly factor-3) (PAF-3)
{Homo sapiens}; contains Pfam profile PF04757: Pex2 /
Pex12 amino terminal region
Length = 393
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 516 ETAMGVSKSTQDSKRIRICYG--RYENVAIYFTWRHTKIWAATGFVNLNLQIYG 671
E ++ V +T+ K I +CY + + FT++ + ATGF +L LQ G
Sbjct: 177 ELSVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALG 230
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 113 EFVGGSADIFRNIVQKSADYDHESVVKIWIGPRLLVFLYDPR 238
E GGS+ R + D+ + + +W GP LL + +PR
Sbjct: 38 EINGGSSSSLREVQDPEIDFGTDRALSLW-GPILLGMMSNPR 78
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 113 EFVGGSADIFRNIVQKSADYDHESVVKIWIGPRLLVFLYDPR 238
E GGS+ R + D+ + + +W GP LL + +PR
Sbjct: 38 EINGGSSSSLREVQDPEIDFGTDRALSLW-GPILLGMMSNPR 78
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 553 ESCVLLLTPIAVSSKFQPCTRSCSH 479
ESC + L + SSK P SCSH
Sbjct: 151 ESCSICLQSLVSSSKTAPTRMSCSH 175
>At1g63710.1 68414.m07210 cytochrome P450, putative similar to
cytochrome P450 GB:O23066 [Arabidopsis thaliana]
Length = 523
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = +1
Query: 298 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKS----FIDLFNANSRA-VVDKLKKEA 462
F LG+G+ S G WR RK A F L+ ++D N +++ + A
Sbjct: 111 FHDLLGDGIFNSDGDTWRFQRKTAALEFTTRTLRQAMARWVDRAIKNRLVPILESARSRA 170
Query: 463 SNFDCHDYMSECTVE 507
D D + T +
Sbjct: 171 EPIDLQDVLLRLTFD 185
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 294 FLQTMARKRSSYQYWSKMEVSS*TYRPHIPSERFEEFH 407
FLQ + K+ QYW++ + R +E F+ FH
Sbjct: 434 FLQEVTSKKDQMQYWARRDEPYRFIRVREFAEAFQSFH 471
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,839,258
Number of Sequences: 28952
Number of extensions: 296463
Number of successful extensions: 821
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -