Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0330
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499FD0 Cluster: protein kinase; n=5; Entamoeba h...    33   6.7  
UniRef50_Q5AUH8 Cluster: Predicted protein; n=1; Emericella nidu...    33   8.8  

>UniRef50_UPI0000499FD0 Cluster: protein kinase; n=5; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 806

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 221 IIINILKTREFP--PIEPRFVNQIIADSKLKESHVHFDRFRTCAN 93
           I++NI  +  F   P+ P  + Q+IAD KLKE   HFD+ R  A+
Sbjct: 626 IVLNIQNSNPFSHVPMTPPVLEQMIADQKLKE---HFDQIRRNAS 667


>UniRef50_Q5AUH8 Cluster: Predicted protein; n=1; Emericella
           nidulans|Rep: Predicted protein - Emericella nidulans
           (Aspergillus nidulans)
          Length = 279

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = -2

Query: 293 NLRTTIY*EAFRIGLRASKLFIFYIIINILKTREFPPIEPRFVNQIIADSKLKESHV 123
           +L   ++  A R+ +RA K +    I+++L+   FP + PRF  ++    K K++ V
Sbjct: 156 SLHLQVHVLAQRLRIRALKFYAVNRIVSVLQRTSFPTVYPRFAREVYWTIKEKDTLV 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,952,452
Number of Sequences: 1657284
Number of extensions: 10419814
Number of successful extensions: 19204
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19200
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)