Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0330
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119039-1|AAM50899.1|  503|Drosophila melanogaster LP06368p pro...    29   6.0  
AE014298-346|AAF45736.1|  503|Drosophila melanogaster CG3656-PB,...    29   6.0  

>AY119039-1|AAM50899.1|  503|Drosophila melanogaster LP06368p
           protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 273 VYGSSQVLTKQYELSF-GVLEPHCLMLSRGERW 368
           V GSSQ+LTK  E SF G      L++S G +W
Sbjct: 87  VLGSSQLLTKSQEYSFLGRWLNEGLLVSNGRKW 119


>AE014298-346|AAF45736.1|  503|Drosophila melanogaster CG3656-PB,
           isoform B protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 273 VYGSSQVLTKQYELSF-GVLEPHCLMLSRGERW 368
           V GSSQ+LTK  E SF G      L++S G +W
Sbjct: 87  VLGSSQLLTKSQEYSFLGRWLNEGLLVSNGRKW 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,811,475
Number of Sequences: 53049
Number of extensions: 467513
Number of successful extensions: 781
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)