Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0329
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 449 GVNSVDSFRAQWYLQPAKYDKTICSTST 532
           GVNS DSF+A   + PA   K I  +ST
Sbjct: 26  GVNSADSFKAS-KVGPAPPIKFINKSST 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/36 (25%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +3

Query: 174 FPVEFRLIFAENAIKLMYKRDGLALTLV-MMFTATM 278
           FP+++ L+F+E  + L++K   + + +  +++ AT+
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVSGLVYIATV 735


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 160 MSLEPWSQS**AYSMQFILLFRISLFTTFVMTSLFF 53
           +S+EP   S   YS+ +ILLF + +  + V  + F+
Sbjct: 21  VSVEPTGFSPKGYSLLWILLFTLGVTISGVYRTDFY 56


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 512 TICSTSTTVNTARL*TLSRTLETSGNRMGL 601
           T+ S  TT+N     + +  L T+GN++G+
Sbjct: 139 TVQSDDTTLNWGTNESYNLDLTTTGNQIGV 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,791
Number of Sequences: 336
Number of extensions: 3051
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)