Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0328
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.6  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -3

Query: 615 KKKNIYIALNKSEMQLPKE*KRNIMAVL 532
           K +++ +   K+E +LP++ K N+M V+
Sbjct: 216 KSEDVPVISLKNENELPQQHKTNVMDVM 243


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 76  FLYILNHNEYLFLNDNRGPI 17
           F  +L HN    LN NR P+
Sbjct: 393 FARLLRHNFNRHLNSNRAPL 412


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 76  FLYILNHNEYLFLNDNRGPI 17
           F  +L HN    LN NR P+
Sbjct: 400 FARLLRHNFNRHLNSNRAPL 419


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 508 FLPIFSFLEHCHYVSLLFFR 567
           F+ +   L++CHY+++L  R
Sbjct: 189 FINLLMELQYCHYLNILRVR 208


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 508 FLPIFSFLEHCHYVSLLFFR 567
           F+ +   L++CHY+++L  R
Sbjct: 189 FINLLMELQYCHYLNILRVR 208


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  ITVVFSIKIDSITTIRLLCSLLIFY 166
           + V FS+  D++  +  L S+LIF+
Sbjct: 222 VFVCFSLVEDTLPCVFFLGSILIFF 246


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 68  IEK*LTLYITVVFSIKIDSITTI 136
           +EK +  Y+  +FS+ +D+   I
Sbjct: 304 LEKPIVFYVANIFSLDLDTFKKI 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,006
Number of Sequences: 336
Number of extensions: 2373
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)