Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0327
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep: ...   180   2e-44
UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca sext...   116   5e-25
UniRef50_Q4QBY8 Cluster: Transcription factor-like protein; n=3;...    38   0.21 
UniRef50_UPI0000E490DD Cluster: PREDICTED: similar to jagged3; n...    34   3.4  
UniRef50_A7S1Y8 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.9  
UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,...    33   7.7  

>UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep:
           Cationic peptide CP8 - Bombyx mandarina (Wild silk moth)
           (Wild silkworm)
          Length = 89

 Score =  180 bits (439), Expect = 2e-44
 Identities = 78/89 (87%), Positives = 78/89 (87%)
 Frame = +1

Query: 82  MRCVTAYGALVCGTDYCEKNPCIQPPLVCPXNTXXRXRHAGXCACCPACVTLLGEGXNCK 261
           MRC  AYGALVCGTDYCEKNPCIQPPLVCP NT  R RHAG CACCPACVTLL EG  CK
Sbjct: 1   MRCAAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCK 60

Query: 262 IYSKELGETPSAVCKEPLICIKRVCTKLV 348
           IYSKELGETPSAVCKEPL CIKRVCTKLV
Sbjct: 61  IYSKELGETPSAVCKEPLKCIKRVCTKLV 89


>UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca
           sexta|Rep: Cationic peptide CP8 - Manduca sexta (Tobacco
           hawkmoth) (Tobacco hornworm)
          Length = 105

 Score =  116 bits (279), Expect = 5e-25
 Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
 Frame = +1

Query: 100 YGALVCGTDYCEKNPCIQP--PLVCPXNTXXRXRHAGXCACCPACVTLLGEGXNCKIYSK 273
           YG LVCG++YC+++PC  P     C   +  R +HAG CACCPACVT+LGE   CK YSK
Sbjct: 18  YGDLVCGSNYCKQHPCGSPIAQSSCRSPSVYRAKHAGKCACCPACVTMLGENAACKTYSK 77

Query: 274 ELGETPSAVCKEPLICIKRVCTKL 345
           ELGETPSA+C++PL C+  VCT++
Sbjct: 78  ELGETPSAICRDPLKCLNGVCTRV 101


>UniRef50_Q4QBY8 Cluster: Transcription factor-like protein; n=3;
           Leishmania|Rep: Transcription factor-like protein -
           Leishmania major
          Length = 772

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +1

Query: 139 NPCIQPPLVCPXNTXXRXRHAGXCACCPACVTLL---GEGXNCKIYSKELGETPSAVCKE 309
           NPC + PL C  +T     H G C  C    TL+   G+       +KE      +VC +
Sbjct: 160 NPC-RRPLACGTHTCPLSCHTGPCPPCSESTTLICYCGQTTKQHPCTKETSFACGSVCGK 218

Query: 310 PLICIKRVCTKL 345
            L C K  CT L
Sbjct: 219 SLRCGKHTCTLL 230


>UniRef50_UPI0000E490DD Cluster: PREDICTED: similar to jagged3; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           jagged3 - Strongylocentrotus purpuratus
          Length = 1212

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
 Frame = +1

Query: 70  NAGGMRCV--TAYGALVCGT--DYCEKNPCIQPPLVCPXNTXXRXRHAGXCACCPACVTL 237
           N GG  C+  T Y  L C    DYCE +PC Q    C  NT    +    C C P     
Sbjct: 670 NNGGFSCICDTGYTGLYCHERIDYCESDPC-QNGGTC-INTVLSIQ----CVCTPG---- 719

Query: 238 LGEGXNCKIYSKELGETPSAVCKEPLICI 324
             EG  C I + E   TP   C+    C+
Sbjct: 720 -WEGLFCHISTDECSATP---CRNNGTCV 744


>UniRef50_A7S1Y8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 541

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 112 VCGTDYCE-KNPCIQPPLVCPXNTXXRXRHAGXCACCPACV 231
           VCG+D     NPC+     C  N     +H G C   P C+
Sbjct: 141 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSPRCM 181



 Score = 32.7 bits (71), Expect = 7.7
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
 Frame = +1

Query: 112 VCGTD-YCEKNPCIQPPLVCPXNTXXRXRHAGXCA-----CCPAC 228
           VCG+D     NPC+    VC  N   R +H G C      C P C
Sbjct: 241 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 285


>UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG3647-PA, isoform A - Tribolium castaneum
          Length = 958

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +1

Query: 160 LVCPXNTXXRXRHAGXCACCPACVTLLGEGXNCKIYSKELGETPSAVCKEPLICIKRVCT 339
           L C  +T  +  H G C  CP  V   G    C     EL +   + C +P+ C  ++C 
Sbjct: 414 LSCGNHTCTKVCHEGDCEACPRDV---GVVKTCPCGRSELKKRRES-CLDPIPCCDKICG 469

Query: 340 KLV 348
           K++
Sbjct: 470 KIL 472


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,687,992
Number of Sequences: 1657284
Number of extensions: 11074196
Number of successful extensions: 25940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25930
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)