Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0325
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022683-1|BAB14177.1|  545|Homo sapiens protein ( Homo sapiens ...   121   3e-27
AK001360-1|BAA91648.1|  627|Homo sapiens protein ( Homo sapiens ...   121   3e-27
AK024031-1|BAB14790.1|  279|Homo sapiens protein ( Homo sapiens ...    77   4e-14

>AK022683-1|BAB14177.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12621 fis, clone NT2RM4001715. ).
          Length = 545

 Score =  121 bits (291), Expect = 3e-27
 Identities = 52/84 (61%), Positives = 72/84 (85%)
 Frame = +1

Query: 4   PHQREVTRILQFAAQASHELVPYEVIEPVMRAIANNFITERNSTDVMAVGLNAVREICTR 183
           PHQREVT+IL FAAQASH LVP E+I+ ++  +ANNF+T++NS +VM VG+NA++EI  R
Sbjct: 248 PHQREVTKILLFAAQASHHLVPPEIIQSLLMTVANNFVTDKNSGEVMTVGINAIKEITAR 307

Query: 184 CPLAIGEDLLRDLVQYKSYKEKSV 255
           CPLA+ E+LL+DL QYK++K+K+V
Sbjct: 308 CPLAMTEELLQDLAQYKTHKDKNV 331



 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 246 KICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVL 416
           K  MM+AR+LI L+R   P++L KK RG+PTEASIE + ++YGEL+ KDYIPG+EVL
Sbjct: 329 KNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARVQEYGELDAKDYIPGAEVL 385


>AK001360-1|BAA91648.1|  627|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10498 fis, clone NT2RP2000328. ).
          Length = 627

 Score =  121 bits (291), Expect = 3e-27
 Identities = 52/84 (61%), Positives = 72/84 (85%)
 Frame = +1

Query: 4   PHQREVTRILQFAAQASHELVPYEVIEPVMRAIANNFITERNSTDVMAVGLNAVREICTR 183
           PHQREVT+IL FAAQASH LVP E+I+ ++  +ANNF+T++NS +VM VG+NA++EI  R
Sbjct: 285 PHQREVTKILLFAAQASHHLVPPEIIQSLLMTVANNFVTDKNSGEVMTVGINAIKEITAR 344

Query: 184 CPLAIGEDLLRDLVQYKSYKEKSV 255
           CPLA+ E+LL+DL QYK++K+K+V
Sbjct: 345 CPLAMTEELLQDLAQYKTHKDKNV 368



 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 246 KICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVL 416
           K  MM+AR+LI L+R   P++L KK RG+PTEASIE + ++YGEL+ KDYIPG+EVL
Sbjct: 366 KNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARVQEYGELDAKDYIPGAEVL 422


>AK024031-1|BAB14790.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13969 fis, clone Y79AA1001511. ).
          Length = 279

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 246 KICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVL 416
           K  MM+AR+LI L+R   P++L KK RG+PTEASIE + ++YGEL+ KDYIPG+EVL
Sbjct: 18  KNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARVQEYGELDAKDYIPGAEVL 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,421,583
Number of Sequences: 237096
Number of extensions: 1042768
Number of successful extensions: 1743
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)