Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0325
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...   149   2e-36
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...   149   2e-36
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...   149   2e-36
AF223065-1|AAF34688.1|  823|Drosophila melanogaster putative mic...    25   4.9  
AY089556-1|AAL90294.1|  819|Drosophila melanogaster LD44201p pro...    25   4.9  
AE014298-2339|AAF48570.3|  819|Drosophila melanogaster CG13956-P...    25   4.9  
AE014298-2338|AAF48571.2|  819|Drosophila melanogaster CG13956-P...    25   4.9  
AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA...    29   7.2  
AY113360-1|AAM29365.1|  662|Drosophila melanogaster HL08076p pro...    28   9.6  
AY061028-1|AAL28576.1|  721|Drosophila melanogaster HL05638p pro...    28   9.6  
AE014297-4091|AAN14404.2|  769|Drosophila melanogaster CG31068-P...    28   9.6  
AE014296-1482|AAN12010.2|  721|Drosophila melanogaster CG32355-P...    28   9.6  

>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score =  149 bits (362), Expect = 2e-36
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = +1

Query: 4   PHQREVTRILQFAAQASHELVPYEVIEPVMRAIANNFITERNSTDVMAVGLNAVREICTR 183
           PHQR+VTR+LQFAAQASHELVP ++IEP+++ IANNFITERNS+DVMA+GLNA REIC R
Sbjct: 345 PHQRQVTRVLQFAAQASHELVPGDIIEPILKTIANNFITERNSSDVMAIGLNATREICMR 404

Query: 184 CPLAIGEDLLRDLVQYKSYKEKSV 255
           CPLA+GEDLL+DL  YK+YKEKSV
Sbjct: 405 CPLAMGEDLLQDLAMYKTYKEKSV 428



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 240 QRKICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVLL 419
           + K  MMAARSLI LYR+ +P LLHKKDRGR TEA  E K + YGE E  D + G+E LL
Sbjct: 424 KEKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGEREVHDTVLGAEALL 483


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score =  149 bits (362), Expect = 2e-36
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = +1

Query: 4   PHQREVTRILQFAAQASHELVPYEVIEPVMRAIANNFITERNSTDVMAVGLNAVREICTR 183
           PHQR+VTR+LQFAAQASHELVP ++IEP+++ IANNFITERNS+DVMA+GLNA REIC R
Sbjct: 345 PHQRQVTRVLQFAAQASHELVPGDIIEPILKTIANNFITERNSSDVMAIGLNATREICMR 404

Query: 184 CPLAIGEDLLRDLVQYKSYKEKSV 255
           CPLA+GEDLL+DL  YK+YKEKSV
Sbjct: 405 CPLAMGEDLLQDLAMYKTYKEKSV 428



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 240 QRKICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVLL 419
           + K  MMAARSLI LYR+ +P LLHKKDRGR TEA  E K + YGE E  D + G+E LL
Sbjct: 424 KEKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGEREVHDTVLGAEALL 483


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score =  149 bits (362), Expect = 2e-36
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = +1

Query: 4   PHQREVTRILQFAAQASHELVPYEVIEPVMRAIANNFITERNSTDVMAVGLNAVREICTR 183
           PHQR+VTR+LQFAAQASHELVP ++IEP+++ IANNFITERNS+DVMA+GLNA REIC R
Sbjct: 345 PHQRQVTRVLQFAAQASHELVPGDIIEPILKTIANNFITERNSSDVMAIGLNATREICMR 404

Query: 184 CPLAIGEDLLRDLVQYKSYKEKSV 255
           CPLA+GEDLL+DL  YK+YKEKSV
Sbjct: 405 CPLAMGEDLLQDLAMYKTYKEKSV 428



 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = +3

Query: 240 QRKICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELETKDYIPGSEVLL 419
           + K  MMAARSLI LYR+ +P LLHKKDRGR TEA  E K + YGE E  D + G+E LL
Sbjct: 424 KEKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGEREVHDTVLGAEALL 483


>AF223065-1|AAF34688.1|  823|Drosophila melanogaster putative
           microtubule severingprotein katanin p80 subunit protein.
          Length = 823

 Score = 24.6 bits (51), Expect(2) = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 149 TAITSVEFRSVIKLFAMARITGSITSY 69
           TAIT V+F     L A  R+ G+++ Y
Sbjct: 190 TAITCVQFHPFEFLLAAGRVDGTVSIY 216



 Score = 23.0 bits (47), Expect(2) = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 197 IARGHLVHISRTAFNPTAI 141
           + RGH+ H++   F+P  +
Sbjct: 140 VCRGHMSHVNSVKFSPDGL 158


>AY089556-1|AAL90294.1|  819|Drosophila melanogaster LD44201p
           protein.
          Length = 819

 Score = 24.6 bits (51), Expect(2) = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 149 TAITSVEFRSVIKLFAMARITGSITSY 69
           TAIT V+F     L A  R+ G+++ Y
Sbjct: 190 TAITCVQFHPFEFLLAAGRVDGTVSIY 216



 Score = 23.0 bits (47), Expect(2) = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 197 IARGHLVHISRTAFNPTAI 141
           + RGH+ H++   F+P  +
Sbjct: 140 VCRGHMSHVNSVKFSPDGL 158


>AE014298-2339|AAF48570.3|  819|Drosophila melanogaster CG13956-PB,
           isoform B protein.
          Length = 819

 Score = 24.6 bits (51), Expect(2) = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 149 TAITSVEFRSVIKLFAMARITGSITSY 69
           TAIT V+F     L A  R+ G+++ Y
Sbjct: 190 TAITCVQFHPFEFLLAAGRVDGTVSIY 216



 Score = 23.0 bits (47), Expect(2) = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 197 IARGHLVHISRTAFNPTAI 141
           + RGH+ H++   F+P  +
Sbjct: 140 VCRGHMSHVNSVKFSPDGL 158


>AE014298-2338|AAF48571.2|  819|Drosophila melanogaster CG13956-PA,
           isoform A protein.
          Length = 819

 Score = 24.6 bits (51), Expect(2) = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 149 TAITSVEFRSVIKLFAMARITGSITSY 69
           TAIT V+F     L A  R+ G+++ Y
Sbjct: 190 TAITCVQFHPFEFLLAAGRVDGTVSIY 216



 Score = 23.0 bits (47), Expect(2) = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 197 IARGHLVHISRTAFNPTAI 141
           + RGH+ H++   F+P  +
Sbjct: 140 VCRGHMSHVNSVKFSPDGL 158


>AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA
            protein.
          Length = 1660

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1    LPHQREVTRILQFAAQASHEL--VPYEVIEPVMRAIANNFITERNSTDV 141
            +PH + +++I Q     SH+L    Y +++  +  I  +F ++R+S+D+
Sbjct: 1598 IPHSKTLSKIFQLLETNSHKLNIEDYLIMQTRLEEIFLDFASKRDSSDI 1646


>AY113360-1|AAM29365.1|  662|Drosophila melanogaster HL08076p
           protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 291 QSMPELLHKKDRGRPTEASIELK 359
           Q + E +HK     PTEA +ELK
Sbjct: 265 QKVEETIHKSTASEPTEAEVELK 287


>AY061028-1|AAL28576.1|  721|Drosophila melanogaster HL05638p
           protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 291 QSMPELLHKKDRGRPTEASIELK 359
           Q + E +HK     PTEA +ELK
Sbjct: 324 QKVEETIHKSTASEPTEAEVELK 346


>AE014297-4091|AAN14404.2|  769|Drosophila melanogaster CG31068-PA
           protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 243 RKICMMAARSLIQLYRQSMPELLHKKDRGRPTEASIELKTKKYGELET 386
           R +C  A +S + +   S  E+  ++DR R   A  E + KK+ + ET
Sbjct: 625 RDVCKPALKSTLSVIPSSDSEVDSREDRHRHRHAREEDRRKKHKDFET 672


>AE014296-1482|AAN12010.2|  721|Drosophila melanogaster CG32355-PA
           protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 291 QSMPELLHKKDRGRPTEASIELK 359
           Q + E +HK     PTEA +ELK
Sbjct: 324 QKVEETIHKSTASEPTEAEVELK 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,825,822
Number of Sequences: 53049
Number of extensions: 331705
Number of successful extensions: 1062
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)