Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0323
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 116 7e-25
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 115 1e-24
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 108 1e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 103 4e-21
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 103 5e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 102 9e-21
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 102 9e-21
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 102 9e-21
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 101 1e-20
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 99 1e-19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 97 4e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 91 2e-17
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 90 4e-17
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 89 7e-17
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 87 4e-16
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 86 7e-16
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 86 7e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 85 2e-15
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 83 6e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 6e-15
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 81 3e-14
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 80 4e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 79 8e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 76 9e-13
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 75 2e-12
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 75 2e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 72 2e-11
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 72 2e-11
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 4e-11
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 69 8e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 67 3e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 67 4e-10
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 4e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 6e-10
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 66 6e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 66 1e-09
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 66 1e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 65 1e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 65 2e-09
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 64 2e-09
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 64 3e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 64 4e-09
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 62 1e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 62 1e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 62 2e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 61 2e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 61 3e-08
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 61 3e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 4e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 60 4e-08
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 60 5e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 60 7e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 60 7e-08
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 59 9e-08
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 59 9e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 59 1e-07
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 58 2e-07
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 58 2e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 58 2e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 2e-07
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 58 3e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 57 4e-07
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 57 5e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 57 5e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 8e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 56 8e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 56 8e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 54 2e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 54 3e-06
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 54 3e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 54 3e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 53 6e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 53 6e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 53 8e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 53 8e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 1e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 52 2e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 2e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 51 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 4e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 5e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 49 9e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 48 2e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 47 5e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 7e-04
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 42 0.011
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.019
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 41 0.033
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.076
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.10
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 38 0.18
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 38 0.31
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.31
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 37 0.40
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.71
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.71
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.71
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.93
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 36 1.2
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 1.2
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.2
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 1.6
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.2
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 33 5.0
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 5.0
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 6.6
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 8.7
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 116 bits (278), Expect = 7e-25
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
QI Y+P L LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS
Sbjct: 244 QILYSPVTLWTLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIM 303
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFL 510
+PLFTG++LN++ LKIQF+
Sbjct: 304 AGIVQWFPLFTGVTLNNFFLKIQFI 328
Score = 110 bits (265), Expect = 3e-23
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DTRAYFTSA
Sbjct: 162 PGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSA 221
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLI 265
T+IIAVPTGIK+F LAT HG +++
Sbjct: 222 TMIIAVPTGIKVFSWLATFHGTQIL 246
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 115 bits (277), Expect = 1e-24
Identities = 57/109 (52%), Positives = 64/109 (58%)
Frame = +1
Query: 10 TRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCXXXXXXXXXXXXX 189
T IWYNFSYYF K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 42 TSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSA 101
Query: 190 XXXXXXXXXXXXF*MTSYNTWNQINYNPNIL*RLGFVFLFTVGGLTGVI 336
F + QINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 102 TMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 108 bits (259), Expect = 1e-22
Identities = 52/89 (58%), Positives = 63/89 (70%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIISH+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSA
Sbjct: 233 PGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSA 292
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIITLI 277
T+IIA+PTGIKIF +AT G+KL+ L+
Sbjct: 293 TMIIAIPTGIKIFSWMATFSGVKLMNNLM 321
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +1
Query: 268 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 447
N IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS
Sbjct: 319 NLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFI 378
Query: 448 N*YPLFTGLSLNSYILKIQF 507
+P+F GL +N Y LKI F
Sbjct: 379 YWFPMFFGLMMNEYFLKIHF 398
Score = 62.5 bits (145), Expect = 9e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+ K + FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 393 FLKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 103 bits (247), Expect = 4e-21
Identities = 49/83 (59%), Positives = 59/83 (71%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 333 IKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILA 392
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PLFTG +LNS K F
Sbjct: 393 GFTHWFPLFTGYTLNSAWAKAHF 415
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+ K +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 410 WAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
Score = 32.7 bits (71), Expect = 8.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETF 70
PGFG+ISH+++ GKKE F
Sbjct: 250 PGFGMISHVVTYYAGKKEPF 269
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 103 bits (246), Expect = 5e-21
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIA+PTG+K+F LAT+HG
Sbjct: 309 TMIIAIPTGVKVFSWLATLHG 329
Score = 102 bits (244), Expect = 9e-21
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I + +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 332 IKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMA 391
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PLFTG +LNS KI F
Sbjct: 392 GFVHWFPLFTGYTLNSVWTKIHF 414
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/43 (72%), Positives = 36/43 (83%), Gaps = 6/43 (13%)
Frame = +3
Query: 489 YTKNSIFT------IFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
YT NS++T +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 403 YTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 102 bits (244), Expect = 9e-21
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 333 IKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILA 392
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PLFTG +LN+ K F
Sbjct: 393 GFTHWFPLFTGYTLNNAWAKAHF 415
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+ K +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 410 WAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2
Query: 149 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 253
VG+ + RAYFTSAT+IIA+PTGIK F LAT G
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXG 330
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 102 bits (244), Expect = 9e-21
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 14 PGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 73
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIA+PTG+K+F LAT+HG
Sbjct: 74 TMIIAIPTGVKVFSWLATLHG 94
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I ++ +L LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 97 IKWDTPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMG 156
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PLF+G +L++ KI F
Sbjct: 157 GFVHWFPLFSGYTLHNTWTKIHF 179
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 102 bits (244), Expect = 9e-21
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIA+PTG+K+F LAT+HG
Sbjct: 309 TMIIAIPTGVKVFSWLATLHG 329
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/85 (52%), Positives = 59/85 (69%)
Frame = +1
Query: 253 NQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXX 432
+ + ++ +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 330 SNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAI 389
Query: 433 XXXXXN*YPLFTGLSLNSYILKIQF 507
+ +PLF+G +L+ KI F
Sbjct: 390 MGGFIHWFPLFSGYTLDQTYAKIHF 414
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
Y K +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 409 YAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 101 bits (243), Expect = 1e-20
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIA+PTG+K+F LAT+HG
Sbjct: 309 TMIIAIPTGVKVFSWLATLHG 329
Score = 99.1 bits (236), Expect = 9e-20
Identities = 48/83 (57%), Positives = 57/83 (68%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I + +L LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS
Sbjct: 332 IKWETPMLWALGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMA 391
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PLFTG +L+ KI F
Sbjct: 392 GFVHWFPLFTGYTLHDTWTKIHF 414
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+TK +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 409 WTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
QINY+P++L LGFVFLFTVGGLTGV+LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 35 QINYSPSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLS 86
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 155 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIKL 262
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HG ++
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQI 36
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 506 FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 616
F NI+ K+NIF TF S + ST+ LS LI +K
Sbjct: 119 FNNIFSCKFNIFPPTFLSISRDASTMLWLSWLILLLK 155
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISH+I+ GK+E F F+V AHH+FTVG+D+DTRAYFT+A
Sbjct: 226 PGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAA 285
Query: 191 TIIIAVPTGIKIFR*LATIHGIKL 262
T+IIAVPTGIK+F +AT+ G L
Sbjct: 286 TMIIAVPTGIKVFSWMATLQGSNL 309
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 319 LGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFS 378
Query: 469 GLSLN 483
G +L+
Sbjct: 379 GYNLH 383
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGI+SHI+S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 191 TIIIAVPTGIKIFR*LATIHG--IKLIITLIF 280
T+IIA+PTGIKIF LATI+G I+L + ++F
Sbjct: 309 TMIIAIPTGIKIFSWLATIYGGSIRLAVPMMF 340
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHD 372
+ F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 342 IAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 90.2 bits (214), Expect = 4e-17
Identities = 46/81 (56%), Positives = 55/81 (67%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIISHI+S GK F F+V AHH+FTVG+D+DTRAYFT+A
Sbjct: 252 PGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAA 310
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIAVPTGIKIF +AT+ G
Sbjct: 311 TMIIAVPTGIKIFSWIATMWG 331
Score = 85.0 bits (201), Expect = 2e-15
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
I Y +L +GF+FLFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS
Sbjct: 334 IQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLS 384
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 420 FFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 89.4 bits (212), Expect = 7e-17
Identities = 45/87 (51%), Positives = 58/87 (66%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG++SHI+S GK F F+V +HH++ VG+D+DTRAYFT+A
Sbjct: 249 PGFGMVSHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAA 307
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T+IIAVPTGIKIF LAT++G L IT
Sbjct: 308 TMIIAVPTGIKIFSWLATLYGGSLRIT 334
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYY 381
LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 341 LGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+ISHI+S +K F FIV AHH++TVG+D+DTRAYFT+A
Sbjct: 257 PGFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAA 315
Query: 191 TIIIAVPTGIKIFR*LATI 247
T+IIAVPTGIKIF +ATI
Sbjct: 316 TMIIAVPTGIKIFSWIATI 334
Score = 83.0 bits (196), Expect = 6e-15
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
I+ +L +GF+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS
Sbjct: 339 IHLKTPMLFAIGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLS 389
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 507 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 422 WSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/87 (50%), Positives = 55/87 (63%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIIS +IS K F FIV +HH++TVG+D+DTRAYFT+A
Sbjct: 276 PGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAA 334
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T+IIA+PTG+KIF LAT +G L T
Sbjct: 335 TLIIAIPTGVKIFSWLATCYGGSLHFT 361
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+++ +L LGFV +FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS
Sbjct: 358 LHFTTPMLFALGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFS 417
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
P GLS ++ KI F
Sbjct: 418 GWYFWIPKIIGLSYDTKASKIHF 440
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +3
Query: 492 TKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+K + +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 436 SKIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+++ P++L LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS
Sbjct: 332 LHFIPSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFS 391
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
P GL N K F
Sbjct: 392 GWYFWIPKILGLDYNLLYSKAHF 414
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIIS IS K F F+V +HH++TVG+D+DTRAYFT+A
Sbjct: 250 PGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAA 308
Query: 191 TIIIAVPTGIKIFR*LATIHG--IKLIITLIF 280
T+IIAVPTGIKIF LAT +G + I +L+F
Sbjct: 309 TLIIAVPTGIKIFSWLATCYGGSLHFIPSLLF 340
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +3
Query: 486 LYTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
LY+K + +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ISHI+ + K F F+V HH+F G+DIDTRAYFT+A
Sbjct: 252 PAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAA 311
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T++IAVPTG+K+F LATI G
Sbjct: 312 TLMIAVPTGVKVFNWLATIFG 332
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +1
Query: 268 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXX 447
+P+ +G V LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS
Sbjct: 341 HPSTFWAIGVVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFW 400
Query: 448 N*YPLFTGL 474
+P +TG+
Sbjct: 401 FWFPFWTGM 409
Score = 55.6 bits (128), Expect = 1e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 424 FIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I++ ++ LGF+FLFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS
Sbjct: 374 ISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFA 433
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+P +G N ++ ++ F
Sbjct: 434 GFYYWFPKMSGKMYNEFLGQLHF 456
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIIS I+S +K F F+V AHH+FT G+ ++ + YFT+A
Sbjct: 292 PGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAA 350
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T++IAVPTGIKIF +ATI G
Sbjct: 351 TMVIAVPTGIKIFSWIATIWG 371
Score = 53.6 bits (123), Expect = 4e-06
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 507 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 457 WVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.0 bits (196), Expect = 6e-15
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
LGF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS
Sbjct: 309 LGFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLS 349
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +2
Query: 119 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 253
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSG 294
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +3
Query: 480 KFLYTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
K +Y + +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 373 KDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG++SHII+ KK F FIV AHH++T GID T+AYFT+A
Sbjct: 253 PGFGLVSHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAA 311
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T++IA+PTGIK+F +AT+ G
Sbjct: 312 TMVIAIPTGIKVFNWIATMWG 332
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/72 (45%), Positives = 45/72 (62%)
Frame = +1
Query: 292 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 471
GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TG
Sbjct: 346 GFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTG 405
Query: 472 LSLNSYILKIQF 507
LS + + + F
Sbjct: 406 LSYSESLGQAHF 417
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 421 FIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIISH++S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIISHVVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 191 TIIIAVPTGIKIF 229
T+IIA+PTGIKIF
Sbjct: 309 TMIIAIPTGIKIF 321
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
+GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS +P
Sbjct: 433 VGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIV 492
Query: 469 GLSLNSYILKIQFL 510
G SLN Y+L+ +L
Sbjct: 493 GYSLNKYLLQGHWL 506
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGI+SHI +F +V HH+F VG D T +F+S
Sbjct: 339 PGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSI 398
Query: 191 TIIIAVPTGIKIFR*LATIH--GIKLIITLIFY 283
T+II VPTGIK+F L ++ G++++ ++++
Sbjct: 399 TMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWW 431
Score = 39.1 bits (87), Expect = 0.10
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 519 IGVNITFFPQHFLGLAGIPRRYSDY 593
+G N+ FFP H+LG+ G+PRR S Y
Sbjct: 510 VGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 75.8 bits (178), Expect = 9e-13
Identities = 43/85 (50%), Positives = 46/85 (54%)
Frame = +1
Query: 238 SYNTWNQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 417
SY + N P I F GGLTGVILANSS DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 418 XXXXXXXXXXN*YPLFTGLSLNSYI 492
+PLFTGL+L I
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNI 327
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 506 FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 616
F IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 332 FSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = +1
Query: 295 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 474
F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+
Sbjct: 354 FIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGI 413
Query: 475 SLNSYILKIQFLQYLL 522
S +S ++ F+ + +
Sbjct: 414 SFDSVMMMAVFVCFFV 429
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/81 (39%), Positives = 42/81 (51%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGIIS + K F V HH++T G+DIDTR YF++A
Sbjct: 259 PVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAA 318
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+IIA+P+ +KIF L T G
Sbjct: 319 TMIIAIPSAVKIFNWLGTFFG 339
Score = 49.2 bits (112), Expect = 9e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 428 FVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG++S I+ Q KK F F V +HH+FTVG+D D+RAYF+ A
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGA 325
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
++IIA+PTG KIF LATI+G
Sbjct: 326 SLIIAIPTGSKIFSWLATIYG 346
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 390
+ + +L +GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 349 LRWTTPLLYAVGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
I++ ++ LGF+FLFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S
Sbjct: 437 ISFKTPMMFALGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMS 487
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ISHI++ KK F F+V AHH++TVG+ + +AYF A
Sbjct: 355 PAFGVISHIVATF-SKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVA 413
Query: 191 TIIIAVPTGIKIFR*LATI 247
T++IAVPTGIKIF +AT+
Sbjct: 414 TMVIAVPTGIKIFSWIATM 432
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3
Query: 507 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 520 WVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG--IKLIITLIF 280
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G IK+ ++F
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLF 399
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
K + +FIGVN TFFPQHFLGL G+PRR SDYPD
Sbjct: 518 KMQFWLLFIGVNATFFPQHFLGLQGMPRRISDYPD 552
Score = 52.4 bits (120), Expect(2) = 3e-07
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 14/58 (24%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGL--------------TGVILANSSIDITLHDTYYVVA 390
I P +L LGFVFLFT+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 391 IKMTPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 25.0 bits (52), Expect(2) = 3e-07
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +1
Query: 370 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 507
+T + HFHYVLS P G + + + K+QF
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQF 521
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS + + L +
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCS 157
Query: 469 GLSLNSYILKIQ 504
G +++L++Q
Sbjct: 158 GYRSAAWLLRVQ 169
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG++SH + + G + + V AHH+FTVG+D+DTR YF+SA
Sbjct: 7 PVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTRVYFSSA 65
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIITLIFY 283
T++IA+PT IK+F + + + L + +Y
Sbjct: 66 TLLIALPTSIKVFSWMVGLRRMALASSAAWY 96
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = +1
Query: 232 MTSYNTWNQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
M S+NT I+ + L F+ LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 41 MASHNTTRTID----LWAALCFILLFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 131 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 244
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGT 39
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 498 NSIFTIFIG-VNITFFPQHFLGLAGIPRRYSDYPD 599
N F +F+ + + F P H LG +PRR DYPD
Sbjct: 133 NIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FT
Sbjct: 363 LGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFT 422
Query: 469 GLSLNSYILKIQF 507
G ++ + K+ F
Sbjct: 423 GRMMSERLGKVAF 435
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
K + + F G N+TFFP H LGL G+PRR Y D
Sbjct: 432 KVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIK 259
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G K
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSK 352
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
LGF+F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL
Sbjct: 369 LGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVL 408
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+FIG N+TFFP H GL G+PRR YPD
Sbjct: 444 MFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIK 259
HH+FT GI + +F++A++ +A+P+GI++F +ATI K
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSK 356
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
I ++ ++L L F+ FT GG TGVIL N +ID+ LHDTYYV+AHFH+VLS
Sbjct: 43 ITHSSSLL-SLLFICTFTFGGTTGVILGNGAIDVALHDTYYVIAHFHFVLS 92
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 140 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIKLIIT 271
++T G+++DTRA+FTS TI+I++PTG K+F L T IT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGIT 44
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 453 ISFIYRPFIKFLYTKNSIFTI-----FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+SF F +N+I + F+GV +TF P HFLG +PRR DYPD
Sbjct: 103 VSFFQESFFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ISH+IS + F +V HH++T G+++DTRAYFTS
Sbjct: 255 PAFGVISHVISTNYCRN-LFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTST 313
Query: 191 TIIIAVPTGIKIFR*LAT 244
TI+I++PTG K+F + T
Sbjct: 314 TILISIPTGTKVFNWICT 331
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1
Query: 295 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
F+ FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 350 FICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLS 388
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
F+GV +TF P HFLG +PRR DYPD
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/83 (42%), Positives = 46/83 (55%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I++ +L LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV++
Sbjct: 332 ISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFG 391
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+P TG N I K F
Sbjct: 392 GVYYIFPKMTGKMYNETIGKWAF 414
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDY 593
K + + F+GVNI F+ +G+ G+PRRY DY
Sbjct: 411 KWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
+I N +L GF+ F +GGLTGV++A+ DI +HDTY+VV HFHYVL
Sbjct: 341 KIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALF 400
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFL 510
+ +P TG +N + ++ F+
Sbjct: 401 SGVYHWFPKMTGRMVNEPLGRLHFI 425
Score = 53.2 bits (122), Expect = 6e-06
Identities = 32/84 (38%), Positives = 42/84 (50%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+IS +I +K F IV AHH+FT G R +F +
Sbjct: 260 PFFGVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMAT 318
Query: 191 TIIIAVPTGIKIFR*LATIHGIKL 262
T++IAVPTGIKIF T+ G K+
Sbjct: 319 TMLIAVPTGIKIFSWCGTLWGGKI 342
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDY 593
FIG+N+TF P H LGL G+ RR + Y
Sbjct: 428 FIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
++ + +L L FV +F +GGL+G+ +A + +DI +HDTY++VAHFHYVL
Sbjct: 379 KVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVF 438
Query: 436 XXXXN*YPLFTGLSLNSYILKIQF 507
+P G +N KI F
Sbjct: 439 GSIYFWFPKMFGRMMNETAGKIHF 462
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P G++S I++ +K F FIV HH+F G++ F A
Sbjct: 298 PAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFMVA 356
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T++IA+P+ +K F L T++G K+ T
Sbjct: 357 TMMIALPSAVKTFNWLGTVYGGKVQFT 383
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSD 590
FI +N TFF H LG+ G PRR +D
Sbjct: 466 FIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/46 (63%), Positives = 40/46 (86%)
Frame = +2
Query: 122 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIK 259
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++ +K
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMK 314
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +1
Query: 232 MTSYNTWNQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
++S T ++ N ++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 307 LSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I + P ++ +G V +F GG+TG+IL N+++DI LHDTYYVVAHFH V+
Sbjct: 393 IIFTPAMMFSIGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMA 452
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +P G ++ + I F
Sbjct: 453 GVYHWFPKMFGRMMDEKLGYIHF 475
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GI S +I+ +K F FIV AHH+F G++ + F
Sbjct: 311 PALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNPFLGSVFMFL 369
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T+IIAVP+ +K F + T+ +I T
Sbjct: 370 TLIIAVPSAVKSFNYITTLWRGNIIFT 396
Score = 39.9 bits (89), Expect = 0.057
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRY 584
F+G + FFP H++G+AG PRRY
Sbjct: 479 FVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 WN-QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 426
WN I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV HFHY++
Sbjct: 412 WNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAF 471
Query: 427 XXXXXXXN*YPLFTGLSLNSYILKIQF 507
+PL+TG + K+ F
Sbjct: 472 AGFAGIYYWFPLYTGRMYQRTLGKMHF 498
Score = 46.8 bits (106), Expect = 5e-04
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GIIS+I+ + G++ F F V AHH+F G+D RA F +
Sbjct: 334 PPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAV 392
Query: 191 TIIIAVPTGIKIFR*LATI--HGIKLIITLIF 280
++ IAVP+ +K F + T+ I+L ++F
Sbjct: 393 SLAIAVPSAVKTFNWITTMWNGNIRLTTPMLF 424
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 519 IGVNITFFPQHFLGLAGIPRRYSDY 593
IG NITFF LG G+PRRY+ Y
Sbjct: 503 IGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 64.5 bits (150), Expect = 2e-09
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
+F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 406 MFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
+I +N ++ + F+ F +GGLTG++ A ID L DTY+VVAHFHYVL
Sbjct: 349 EIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALF 408
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFLQYLL 522
+P TG LN I +QF ++L
Sbjct: 409 SAAYYWFPKMTGRMLNERIGILQFWLWVL 437
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFG+IS +I +K + + V AHH+F VG+ + +F
Sbjct: 268 PGFGMISEVIPVF-SRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVG 326
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
+++IA+PTGIK+F AT+ G
Sbjct: 327 SLLIAIPTGIKVFNWTATLWG 347
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 519 IGVNITFFPQHFLGLAGIPRRYSDYPD 599
+G N+TF QHFLGL G+PRR Y D
Sbjct: 437 LGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 295 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
F+F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS
Sbjct: 346 FIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLS 384
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+IS I+ + G + F V AHH+F VG+D+D+RAYF
Sbjct: 252 PVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGV 310
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIITLIFY 283
+I+I +PT +K+F + + +IIT Y
Sbjct: 311 SILIGLPTCVKLFNWIYSFLYTDMIITFEVY 341
Score = 46.0 bits (104), Expect = 9e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 504 IFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 596
I T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 416 ISTLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
+GF+ +F +GGLTGV++A+ D +HDTY+VVAHFHYVL
Sbjct: 357 IGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVL 396
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDY 593
IF G N+TFFP H LGL G+PRR Y
Sbjct: 432 IFSGFNLTFFPMHILGLQGMPRRIYTY 458
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P G++S I++ ++ F F + HH+F G+ ++FT++
Sbjct: 265 PAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTAS 323
Query: 191 TIIIAVPTGIKIFR*LATI 247
++ IAVP G++IF LATI
Sbjct: 324 SMAIAVPAGLQIFCWLATI 342
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 WN-QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 426
W+ I+ +L LGF+ F GGLTG+ L N +D+ L DT +VVAHFH V+
Sbjct: 367 WHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIM 426
Query: 427 XXXXXXXN*YPLFTGLSLNSYILKIQF 507
+ YP TG LN + K F
Sbjct: 427 VVLGAIYHWYPKVTGRMLNDVLGKFHF 453
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI+S +IS +K F F+V AHH++ G+ +F +
Sbjct: 289 PAFGIVSDLISTH-ARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATT 347
Query: 191 TIIIAVPTGIKIFR*LATI-HG-IKLIITLIF 280
T+IIA+PT IK++ + T+ HG I L + ++F
Sbjct: 348 TLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLF 379
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
K + F+G + FFP H+LGL G+PRRY + D
Sbjct: 450 KFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/85 (37%), Positives = 44/85 (51%)
Frame = +1
Query: 253 NQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXX 432
+++ N L LGF+ +F GG++G LA SIDI LH TY+VV HFH V+
Sbjct: 377 SRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGV 436
Query: 433 XXXXXN*YPLFTGLSLNSYILKIQF 507
+P TG +N + KI F
Sbjct: 437 FAGTYFWFPKMTGHMMNETLGKIHF 461
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
FIG F P H+LG+ G RRYS + D
Sbjct: 465 FIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+ Y+ +L LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++
Sbjct: 369 LRYDTPMLFALGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFT 428
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+P G L + KI F
Sbjct: 429 GIYFWFPKMFGRRLGERLGKIHF 451
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+N ++L +GF+ +F +GG++GV LA+ I++ D+YYVVAH HYVL
Sbjct: 349 LNLTTSMLYAIGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFA 408
Query: 439 XXXN*YPLFTGLSLNSYILKIQFLQYLL 522
+P TG L+ + K QF L+
Sbjct: 409 GIFYWFPKMTGRMLDERLGKWQFWLMLI 436
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GIIS ++ +K F F+V AHH+F VG+ A+F +A
Sbjct: 267 PTMGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAA 325
Query: 191 TIIIAVPTGIKIFR*LATI 247
+ +IAVPTG+KIF LAT+
Sbjct: 326 SFLIAVPTGVKIFNWLATM 344
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDY 593
K + + I N+TFFP H G AG+PRR Y
Sbjct: 428 KWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 158 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIKLIIT 271
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HG ++ T
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYT 38
Score = 52.8 bits (121), Expect = 8e-06
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH--DTYYVVAHFHYVLSXXXXXX 429
QINY P++L LGFVFLFTVGG +N S+ I + Y+++ +++
Sbjct: 34 QINYTPSLLWALGFVFLFTVGGPN---WSNFSLFINWYCSSRYHIMLLLIFIMFFQLGLY 90
Query: 430 XXXXXXN*YP--LFTGLSLNSYILKIQFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTH 603
+ L LK Y LE I HF HNIF EYLDDIQI
Sbjct: 91 LLLYQDSFIDTHYLQDFLLMQNDLKFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMD 150
Query: 604 IFHEI 618
+ E+
Sbjct: 151 LIVEM 155
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +1
Query: 295 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 350 FIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 519 IGVNITFFPQHFLGLAGIPRRYSDYPD 599
I V +TF P HF G + +PRR DYPD
Sbjct: 426 ISVLLTFLPMHFTGFSPLPRRIPDYPD 452
Score = 36.7 bits (81), Expect = 0.53
Identities = 27/88 (30%), Positives = 38/88 (43%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
PGFGIIS ++S KE F + YFT+
Sbjct: 255 PGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFTTV 313
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIITL 274
TI+IA+PTG KIF + T+ ++ I +L
Sbjct: 314 TILIALPTGNKIFNWVTTLQCVESIKSL 341
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 250 WN-QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 426
WN ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV HFH+++
Sbjct: 381 WNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGF 440
Query: 427 XXXXXXXN*YPLFTG 471
+P+ TG
Sbjct: 441 ALFAASYYWFPMVTG 455
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GI+S I+ + G+K F F V AHH+FT GID R+ F +
Sbjct: 303 PPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAV 361
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
++ I++P+ +K+F + T+ KL +T
Sbjct: 362 SLAISIPSAVKVFNWITTMWNGKLRLT 388
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 507 FTIFIGVNITFFPQHFLGLAGIPRRYSDY 593
+T +G N TF +LG G+PRRY+ Y
Sbjct: 468 WTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/88 (34%), Positives = 47/88 (53%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+ Y +L + F+ F +GG+TGV+LA ++ D HDTY+VVAHFHYV+
Sbjct: 340 VKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLA 399
Query: 439 XXXN*YPLFTGLSLNSYILKIQFLQYLL 522
+P G L+ + KI F+ + +
Sbjct: 400 GVHFWWPKMFGKILHETMGKISFVLFFI 427
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/81 (39%), Positives = 39/81 (48%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI S +I +K F F+V HH+FT G+ A F A
Sbjct: 258 PAFGIFSEVIPVF-ARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVA 316
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T+ IA+PTGIKIF L TI G
Sbjct: 317 TMAIAIPTGIKIFNWLLTIWG 337
Score = 39.9 bits (89), Expect = 0.057
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRR 581
K S FIG ++TFF QHF+GL G+PRR
Sbjct: 419 KISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
++ +N L + F+ +F VGGL+G+ +A +D+ HDTY++VAHFHY+L
Sbjct: 382 KLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVF 441
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFL 510
+P G +N + K F+
Sbjct: 442 AGIQFWFPKMFGRMMNEKLGKTHFV 466
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSD 590
K FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 462 KTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +2
Query: 119 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIKL 262
FIV HH+FT G++ F +T++IA+P+ IK F ATI G KL
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKL 383
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P T
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMT 410
Query: 469 GLSLNSYILKIQFLQYLL 522
G + + ++ F +L+
Sbjct: 411 GRMYDERLGRLHFWLFLV 428
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GI++ + S +K F +V AHH+FTVG + F
Sbjct: 259 PYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFF 317
Query: 191 TIIIAVPTGIKIFR*LATIHGIKL 262
T +IAVPTG+K+F + T+ G KL
Sbjct: 318 TALIAVPTGVKLFNIIGTLWGGKL 341
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 507 FTIF-IGVNITFFPQHFLGLAGIPRRYSDY 593
F +F +G +TF PQ+ LG G+PRRY Y
Sbjct: 423 FWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +1
Query: 292 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 471
GFV +F VGG++GV+ A +D L DTY+VVAH HYVL +P FTG
Sbjct: 378 GFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTG 437
Query: 472 LSLNSYILKIQF 507
+N K+ F
Sbjct: 438 RMMNERFGKLTF 449
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 489 YTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 596
+ K + + + +G N+ FFP H GL G+PRR YP
Sbjct: 444 FGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 119 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 247
F V HH+F GI A+F +A+++I++P+ + +F +ATI
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATI 362
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 59.3 bits (137), Expect = 9e-08
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI+SHI F +V AHH+F VG D+ T +F+S
Sbjct: 13 PVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVGYDVHTAVFFSSV 72
Query: 191 TIIIAVPTGIKIFR*LATIHG 253
T++I +PTGIK+F L + G
Sbjct: 73 TMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
QI + +L +GF+ FT+GGL+G + A + D HDTY+VVAHFHYVL
Sbjct: 350 QIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVL 400
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P GIIS +I +K F F V +HH+FTVG+ + F+
Sbjct: 269 PAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLT 327
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T+ IAVPTG+KIF L+T+ G ++ T
Sbjct: 328 TMAIAVPTGVKIFNWLSTMWGGQIRFT 354
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI S ++S GK+ F F+V HH FT+G + A+F A
Sbjct: 294 PAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIA 352
Query: 191 TIIIAVPTGIKIFR*LATIH 250
T+II++PTG+K+F L TI+
Sbjct: 353 TMIISIPTGVKLFNWLFTIY 372
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
++ + IL LGF+ F++GG+TGV+LA D LH++ +++AHFH +
Sbjct: 375 RLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYL 434
Query: 436 XXXXN*YPLFTGLSLNSYILKIQF 507
+P G LN + K F
Sbjct: 435 AGVSFWFPKVFGFKLNDKLGKASF 458
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I++ +L LG VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL
Sbjct: 287 IHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILG 346
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+ +PL TG + K+ F
Sbjct: 347 AVIHWFPLATGKYYPENLGKLSF 369
Score = 46.0 bits (104), Expect = 9e-04
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG S II ++ F F + HH+F G+ TR F+
Sbjct: 205 PVFGFYSEIIPVF-ARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYT 263
Query: 191 TIIIAVPTGIKIFR*LATIH 250
T++IAVPTGIKIF + T++
Sbjct: 264 TLLIAVPTGIKIFNWMLTLY 283
Score = 39.9 bits (89), Expect = 0.057
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 495 KNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 596
K S + IF G NI +F Q G+ G PRRY DYP
Sbjct: 366 KLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/89 (37%), Positives = 43/89 (48%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
++ + L LG + LF +GG+TGV L +D TY+VVAHFHYV+
Sbjct: 352 RVRFTTPFLFSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALF 410
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFLQYLL 522
YP TG N + KIQF Y L
Sbjct: 411 GGLYYWYPKITGKMYNETLGKIQFGVYFL 439
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 119 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 247
F+V HH+F GI++ + F + TI I++P + +F + T+
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTM 348
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
+I++ +L L F+ F +GG+TGV+LA ++ D H+TY++V+HFHYVL
Sbjct: 370 RISFTTPMLWALAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACF 429
Query: 436 XXXXN*YPLFTGLSLNSYILKIQFLQYLL 522
YP G LN I K F +++
Sbjct: 430 AGFIFWYPKMFGHKLNERIGKWFFWIFMI 458
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI S IIS +K+ F F+V HH FT+G ++F+
Sbjct: 289 PAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSIT 347
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T+ I++PTG+KIF L T++ ++ T
Sbjct: 348 TMAISIPTGVKIFNWLFTMYKGRISFT 374
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 507 FTIF-IGVNITFFPQHFLGLAGIPRRYSDY 593
F IF IG NI FFPQ+FLGL G+PRR Y
Sbjct: 453 FWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
LGF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL P FT
Sbjct: 383 LGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFT 442
Query: 469 GLSLNSYILKIQF 507
G ++ + K F
Sbjct: 443 GRMMSERLGKWVF 455
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +2
Query: 131 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 247
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
Score = 35.9 bits (79), Expect = 0.93
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDYP 596
+F G N+ FF H G+ G+PRR + YP
Sbjct: 458 MFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.2 bits (132), Expect = 4e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 292 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
GF+F GG+TG+ LA S+D+ HDTY++VAHFH+++
Sbjct: 361 GFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIM 399
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
I +G N TF PQ LG G+PRRY YP+
Sbjct: 435 IILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDY 593
+F+G NITFFP HF GLAG+PRR Y
Sbjct: 505 MFVGFNITFFPMHFTGLAGMPRRVYTY 531
Score = 37.5 bits (83), Expect = 0.31
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 244
HH+FT GI + ++F +A+ +A+P+G+++F +AT
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIAT 410
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ S I++ K+ F + V AHH+FTVG+DID+R+YF+ A
Sbjct: 259 PVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIA 317
Query: 191 TIIIAVPTGIKIF 229
T II++PT +K+F
Sbjct: 318 TSIISIPTSVKMF 330
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 295 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 354 FLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLS 392
Score = 36.3 bits (80), Expect = 0.71
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 453 ISFIYRPFIKFLYTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
I F Y F F + F + +G + F+P H GL+G+ RR +Y D
Sbjct: 409 IIFSYSIFESFSFYHT--FLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.0 bits (129), Expect = 8e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 292 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
GF+F GG+TG+ L S+D+ HDTY+VVAHFH+++
Sbjct: 368 GFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIM 406
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 513 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 599
I +G N TF PQ LG G+PRRY +YP+
Sbjct: 442 IILGFNATFIPQFLLGNNGMPRRYYEYPE 470
Score = 35.9 bits (79), Expect = 0.93
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG++S +++ +K F F HH+F G F
Sbjct: 275 PSFGVMSEVVATY-SRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVL 333
Query: 191 TIIIAVPTGIKIFR*LATIH 250
T+I+ V T IK+F + T++
Sbjct: 334 TMIVGVFTAIKVFNWVGTVY 353
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 56.0 bits (129), Expect = 8e-07
Identities = 21/48 (43%), Positives = 36/48 (75%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+I ++ ++ L F+FLF +GG+TG++LAN +D +H+T ++VAHFH
Sbjct: 394 RIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFH 441
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ S I S GK F F+V HH FT+G A F A
Sbjct: 313 PAFGVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIA 371
Query: 191 TIIIAVPTGIKIF 229
+++I +PTG+KI+
Sbjct: 372 SMLIGIPTGVKIY 384
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
I + ++ +GF+ F GGLTG++LA+ +D L D+Y+++AHFHY L
Sbjct: 354 ITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCA 413
Query: 439 XXXN*YPLFTGLSLNSYILKIQF 507
+P TG ++ + KI F
Sbjct: 414 GVYFWFPKMTGRMMDERLGKIHF 436
Score = 38.3 bits (85), Expect = 0.18
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI+S II +K F V AHH+F G + +F+
Sbjct: 274 PFFGIVSEIIPVF-SRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFM 330
Query: 191 TIIIAVPTGIKIFR*LATI 247
T +I+VPTG+K F + T+
Sbjct: 331 TFLISVPTGVKFFNWVGTM 349
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYPD 599
F+G + TF QH++G G+PRRY+DY D
Sbjct: 440 FVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 140 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 229
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
+ F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 502 MSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +2
Query: 119 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR-*LATIHG-IKLIITLIFYED* 292
++V HH++ VG+D +R +++ TI+I++P IK+ L+ ++G +K+ + +F
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSF 504
Query: 293 VLYF 304
+L F
Sbjct: 505 LLLF 508
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 531 ITFFPQHFLGLAGIPRRYSDYP 596
+ F PQ +LG +G+PRR DYP
Sbjct: 583 VAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 259 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXX 438
+ N +L +G + F G+TGV+LA IDI + +TY+VVAHFHYV+
Sbjct: 357 LRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFA 416
Query: 439 XXXN*YPLFTGLSLNSYILKIQFL 510
+ +P FTG + K+ F+
Sbjct: 417 GIYHWFPKFTGKMYYEGLGKVHFV 440
Score = 42.3 bits (95), Expect = 0.011
Identities = 26/79 (32%), Positives = 35/79 (44%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI S + +K F IV AHH+F G R F
Sbjct: 275 PVFGIFSELFPVY-ARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFT 333
Query: 191 TIIIAVPTGIKIFR*LATI 247
T++IA+PTG+K+F L T+
Sbjct: 334 TMLIAIPTGVKVFAWLGTL 352
Score = 33.1 bits (72), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDY 593
FIG + + P H+ GL G+PRR + Y
Sbjct: 443 FIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
++ + P +L LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++
Sbjct: 393 RLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMM 443
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG IS II +K F + V HH FT+G +F++A
Sbjct: 312 PAFGFISEIIPTF-AEKPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTA 370
Query: 191 TIIIAVPTGIKIFR*LATI 247
T+++ +PTG+K+F T+
Sbjct: 371 TMLVGIPTGVKVFNWALTL 389
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXX 435
++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+AHFH V+
Sbjct: 374 RLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYI 433
Query: 436 XXXXN*YPLFTGLSLN 483
+P G +LN
Sbjct: 434 AGFAYWFPKAFGFTLN 449
Score = 53.6 bits (123), Expect = 4e-06
Identities = 29/87 (33%), Positives = 42/87 (48%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FG+ S + S GK+ F F V HH FT+G +F A
Sbjct: 293 PAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLA 351
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIIT 271
T++I++PTG+K+F L TI+ +L T
Sbjct: 352 TMLISIPTGVKLFNWLFTIYQGRLRFT 378
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 53.2 bits (122), Expect = 6e-06
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1
Query: 16 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 132
IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 20 IWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
+I +L L F+ F VGG+TGV ++D+ LHDTY+V+ HFHY+++
Sbjct: 340 RIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVN 391
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P G++S +I Q ++ + F V HH+FT D R A
Sbjct: 259 PAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIA 317
Query: 191 TIIIAVPTGIKIFR*LATIHG--IKLIITLIFYED*VLYF 304
T+ +A+P+G+K+F +AT++G I+L ++F +L+F
Sbjct: 318 TMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFF 357
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 292 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 471
G + +FT GGLTGV++A + D +HDTY++VAH HY L YP+ T
Sbjct: 384 GGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITK 443
Query: 472 LSLNSYILKIQF 507
+L+ + + F
Sbjct: 444 KALSERLGRWSF 455
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 438 GIY*LISFIYRPFIKFLYTKNSIFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 596
G+Y I + + + S + +F G N+TF P H GL G+PRR YP
Sbjct: 433 GVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
Score = 39.9 bits (89), Expect = 0.057
Identities = 16/51 (31%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT--IHGIKLIITLIF 280
HH+FT G+ + +F++A+ + +PTGI++F +AT + +K+I+ +++
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLW 381
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 229
HH+FTVG+D++T +F+S T+II VPTGIK+F
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVF 84
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
L F F +GGLTGV++A D +HDTY++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVL 396
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 247
HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P FGI S IIS K F F+V HH FT+G + +F+ +
Sbjct: 288 PSFGIFSEIISYIC-VKSVFSYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSIS 346
Query: 191 TIIIAVPTGIKIFR*LATI 247
T+IIA+PTG+KIF + TI
Sbjct: 347 TMIIAIPTGVKIFNWIFTI 365
Score = 46.4 bits (105), Expect = 7e-04
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
+ F+ +F++GG +GVIL+ ++D H++ +++AHFH V+
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVI 419
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 WN-QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 426
WN +I ++ ++ +G + LF G GV+ A +D T HDTY+VV HFH +
Sbjct: 329 WNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAF 388
Query: 427 XXXXXXXN*YPLFTGLSLNSYILKIQFL 510
+P TG N + KI F+
Sbjct: 389 GSIGFFYYMFPFVTGRMYNEKLGKIHFV 416
Score = 39.5 bits (88), Expect = 0.076
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRRYSDYP 596
F+G + FF QH LG+ G+PRR DYP
Sbjct: 419 FVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +1
Query: 265 YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 444
Y +L +G + F +GG TGV L + +ID TY+VVAHFHY+L
Sbjct: 341 YTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGL 400
Query: 445 XN*YPLFTGLSLNSYILKIQFLQYLL 522
+P TG + + + KI F +L
Sbjct: 401 YYWWPKITGRTYSERLGKIHFALAML 426
Score = 41.1 bits (92), Expect = 0.025
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 190
P G ++ +IS GK + F+V HH+F G +I TR +++
Sbjct: 257 PALGAMADVISTFSGKP-IYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRLFYSIT 315
Query: 191 TIIIAVPTGIKIFR*LATIHGIKLIITL 274
TI+I++P + + + T++ +L+ T+
Sbjct: 316 TILISIPFEMAVMSFIFTLYKGRLVYTV 343
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 161 IDTRAYFTSATIIIAVPTGIKIFR*LAT 244
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 506 FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 616
FYNI+ K IFSTTFF S +T T+ S LI +K
Sbjct: 118 FYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLIQLLK 154
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
L F F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVL 396
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 247
HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 122 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 229
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
+I Y + + F+ +F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 329 EIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 134 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 253
HH+FT + + ++ T+ IA+P+G+K+ AT++G
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYG 327
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 468
+GF+F F +GG+TGV L D + +YYVVAHFH V+ +P T
Sbjct: 359 IGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMT 418
Query: 469 GLSLNSYILKIQFLQYLL 522
G L+ + F +++
Sbjct: 419 GRFLDEKVGLAHFWLFMI 436
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 122 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGIKLIITLIFY 283
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G ++++ + Y
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTY 356
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 507 FTIF-IGVNITFFPQHFLGLAGIPRRYSDYP 596
F +F IG +TF PQ+ LGL G+PRRY YP
Sbjct: 431 FWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 307 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 471
F +GG++GV ++ +ID +H YYVVAHFHY + +P FTG
Sbjct: 376 FMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTG 430
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 256 QINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
++ N +L L + F +GGLTG+ A+ D+ LH+TY+V+AHFH
Sbjct: 422 RLRINAAVLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIAHFH 469
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 255 IPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 124
+P + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 304 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 40.7 bits (91), Expect = 0.033
Identities = 36/73 (49%), Positives = 38/73 (52%)
Frame = +1
Query: 472 LSLNSYILKIQFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLY 651
LS++SY K FL Y E I F NIF LEYLDDI IIQ EI F H F
Sbjct: 401 LSIHSYS-KFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHHSDLTFHC 459
Query: 652 YQ***Y*LLFENQ 690
Y LLFENQ
Sbjct: 460 LPSYSYSLLFENQ 472
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.076
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 298 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +1
Query: 289 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 444
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIA 383
Query: 445 XN*YPLFTGLSL 480
+ +P TG +L
Sbjct: 384 YDLWPHLTGRAL 395
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 FIGVNITFFPQHFLGLAGIPRR--YSDYPD 599
FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 409 FIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 506 FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 616
+ NIY SK NIFS TFF +T +F SRLI +K
Sbjct: 118 YNNIYSSKSNIFSPTFFSACRDTPPLFWFSRLILLLK 154
Score = 34.7 bits (76), Expect = 2.2
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 1/109 (0%)
Frame = +3
Query: 252 ESN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCN 431
++N L P + FC FI+ N +FSQF CN
Sbjct: 33 DTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLRSFNSSSICN 92
Query: 432 YWGIY*LISFIYRPFIKFLYTKNSIF-TIFIGVNITFFPQHFLGLAGIP 575
Y IY L+ + F K KNSI+ I+ + F P F P
Sbjct: 93 YISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTP 141
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.31
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 298 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 11 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 172
P FG++S I+ Q KK F F V +HH+FTVG+D D R
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.71
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 289 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.71
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 331 VILANSSIDITLHDTYYVVAHFHYV 405
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.71
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 313 VGGLTGVILANSSIDITLHDTYYVVAHFH 399
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.93
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 307 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 408
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +1
Query: 298 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 477
+ F GG+ G+I A+ ++ +H+T +VV HFH + P TG
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRP 412
Query: 478 LNSYILKIQFLQYL 519
+ K+ +Q +
Sbjct: 413 FSRLAKKLALIQVI 426
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 268 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 411
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 268 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 250 WNQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
W + ++ +L + LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 347 WREPSFTTQVL----AMILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 304 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 16 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 147
IW +F+ T FW+ N L + SNW I C+S ++H
Sbjct: 19 IWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPHVH 62
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 250 WNQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
W+ + +L LGF+ GG G++ A+ ++D +H+T +V HFH
Sbjct: 6 WDNPAFVAPVLGLLGFI----PGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 6.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 304 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 399
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 8.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 319 GLTGVILANSSIDITLHDTYYVVAHFHYVL 408
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,829,269
Number of Sequences: 1657284
Number of extensions: 6431408
Number of successful extensions: 16664
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 16016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16626
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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