Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0321
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 500 ICIKXNDNRTISLFKKKIYLGTLSDFNNLLIIY 402
           IC     ++ + LFK+ I+  T    N+ +I Y
Sbjct: 94  ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDY 126


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 500 ICIKXNDNRTISLFKKKIYLGTLSDFNNLLIIY 402
           IC     ++ + LFK+ I+  T    N+ +I Y
Sbjct: 112 ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDY 144


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 92  WLIVSLFYWRFFFCF 48
           WL  S F+ +FF C+
Sbjct: 412 WLSCSSFFQQFFHCY 426


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 176 FRLFTRAHGAIFIHWSLFFWRTFF*YLFWLIVSLF 72
           FR+ T  + ++ I+  L F   F      LIV+LF
Sbjct: 74  FRIATNENNSLVINKRLIFIECFVMMALTLIVTLF 108


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 436 VPKYIFFLNNEMV 474
           VP Y+FF+ NE +
Sbjct: 142 VPDYVFFVENEPI 154


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 176 FRLFTRAHGAIFIHWSLFFWRTFF*YLFWLIVSLF 72
           FR+ T  + ++ I+  L F   F      LIV+LF
Sbjct: 74  FRIATNENNSLVINKRLIFIECFVMMALTLIVTLF 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,129
Number of Sequences: 336
Number of extensions: 1875
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)