Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0319
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.9  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    24   5.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.9  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   9.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.1  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 204 SLIKIAILKKPSE*LNKIQLLITILLSVVPF 112
           S + + +   PS+   KI L I+ILLS+  F
Sbjct: 254 SFLSVLVFYLPSDSGEKISLCISILLSLTVF 284


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 690 GEFPPLNLLPKSTDSLQQCLGNLPGSVPRLSES-IW 586
           G+  P NLLP +  S  +  G+L  + P  +ES IW
Sbjct: 194 GKLSPYNLLPSNRTSFYRYEGSL--TTPACAESVIW 227


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 204 SLIKIAILKKPSE*LNKIQLLITILLSVVPF 112
           S + I +   PS+   K+ L I+ILLS+  F
Sbjct: 254 SFLTILVFYLPSDSGEKVSLSISILLSLTVF 284


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 209 ENVCCPTCISPTESR 253
           E VCC  C+ PT S+
Sbjct: 43  EFVCCGPCVEPTCSK 57


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 401 HTYQQLEDGAYGATVLKLILSLQML 327
           HT  Q  DGA+GA +++    +Q L
Sbjct: 425 HTGMQRGDGAFGALIIRKDNDIQEL 449


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,620
Number of Sequences: 2352
Number of extensions: 16757
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)