Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0319
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF018078-1|AAB70303.1|  654|Drosophila melanogaster unknown prot...    29   4.5  
AY121687-1|AAM52014.1|  455|Drosophila melanogaster RE37904p pro...    29   6.0  
AE014134-1337|AAF52554.3|  678|Drosophila melanogaster CG7179-PA...    29   6.0  
AY089519-1|AAL90257.1|  395|Drosophila melanogaster GM12762p pro...    29   7.9  
AM231687-1|CAJ77750.1|  395|Drosophila melanogaster GDP-mannose ...    29   7.9  
AE014134-828|AAF52189.2|  395|Drosophila melanogaster CG8890-PA ...    29   7.9  

>AF018078-1|AAB70303.1|  654|Drosophila melanogaster unknown
           protein.
          Length = 654

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 271 QKDCFIGKIFFLEKKKEFGNICRLRINFK 357
           Q+DC    +F++EK     N+CRLRI FK
Sbjct: 355 QRDC----VFYIEKSS--ANVCRLRIQFK 377


>AY121687-1|AAM52014.1|  455|Drosophila melanogaster RE37904p
           protein.
          Length = 455

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 271 QKDCFIGKIFFLEKKKEFGNICRLRINFK 357
           Q+DC    +F++EK     N+CRLRI FK
Sbjct: 136 QRDC----VFYIEKSSP--NVCRLRIQFK 158


>AE014134-1337|AAF52554.3|  678|Drosophila melanogaster CG7179-PA
           protein.
          Length = 678

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 271 QKDCFIGKIFFLEKKKEFGNICRLRINFK 357
           Q+DC    +F++EK     N+CRLRI FK
Sbjct: 359 QRDC----VFYIEKSSP--NVCRLRIQFK 381


>AY089519-1|AAL90257.1|  395|Drosophila melanogaster GM12762p
           protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 237 EIHVGQQTFSSSLIKIAILKKPSE*LN 157
           ++H G  T SSSL+KI  + KP+E  N
Sbjct: 104 KLHYGDMTDSSSLVKIINMVKPTEIYN 130


>AM231687-1|CAJ77750.1|  395|Drosophila melanogaster GDP-mannose
           4,6-dehydratase protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 237 EIHVGQQTFSSSLIKIAILKKPSE*LN 157
           ++H G  T SSSL+KI  + KP+E  N
Sbjct: 104 KLHYGDMTDSSSLVKIINMVKPTEIYN 130


>AE014134-828|AAF52189.2|  395|Drosophila melanogaster CG8890-PA
           protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 237 EIHVGQQTFSSSLIKIAILKKPSE*LN 157
           ++H G  T SSSL+KI  + KP+E  N
Sbjct: 104 KLHYGDMTDSSSLVKIINMVKPTEIYN 130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,226,453
Number of Sequences: 53049
Number of extensions: 724720
Number of successful extensions: 1567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)