Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0318
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    24   1.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.2  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 507 LQAYEYIEASFTIADRIYGSTFFIA--TGFHGISCN*LEL 620
           LQ  +Y+E +   + R+Y S  FI+   G   ++CN L+L
Sbjct: 59  LQEMKYLERAIKESLRLYPSVHFISRKLGEDFVTCNGLKL 98


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 474 FNYFIRILFYYLQAYEYIEASFTIADRIYGSTFFIA 581
           ++YF  + + Y      +   F   D++ G T F+A
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLA 120


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 474 FNYFIRILFYYLQAYEYIEASFTIADRIYGSTFFIA 581
           ++YF  + + Y      +   F   D++ G T F+A
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLA 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,099
Number of Sequences: 336
Number of extensions: 2466
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)