Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0317
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.0  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 301 FWG*TDYHGQRV 266
           FWG T+YH  RV
Sbjct: 493 FWGTTEYHNWRV 504


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 94  LRNKKDRRPNKTVITRYLRTKLYI*RPLKPE 186
           L N +DRR   TV   YLR  +    P KP+
Sbjct: 21  LENIRDRRVLPTVEPGYLRPLIPATAPQKPD 51


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 411 TGFTAAHCYASCVDGWSTESRCVVHLGLLVK 319
           T F AAHCY +       ++R ++  G L+K
Sbjct: 811 TIFNAAHCYLATELVLMLKNRYIILNGRLIK 841


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 208 HKLTMCGLRGTT 243
           +K T+CG+ GTT
Sbjct: 352 NKATLCGIFGTT 363


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 449 HSTVEGCVFITIRRVLPRLI 390
           +S +EG +F  + +  P+LI
Sbjct: 270 NSAIEGIIFFNLAKSWPQLI 289


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 104 LFRNLCRSVFLLFFGVFY 51
           L  +L  S++++FF +FY
Sbjct: 169 LIGDLHTSIYIIFFDMFY 186


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 208 HKLTMCGLRGTT 243
           +K T+CG+ GTT
Sbjct: 352 NKATLCGIFGTT 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,442
Number of Sequences: 336
Number of extensions: 3134
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)