Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0317
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.4  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    25   1.9  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   5.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   7.6  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 TMCGLRGTTGYCCITS*LSVRGSLF 291
           T+ GL  T+GY CI+      GS F
Sbjct: 586 TVTGLHETSGYTCISDETEAPGSCF 610


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 402 TAAHCYASCVDG 367
           TAAHCYA   DG
Sbjct: 175 TAAHCYAESADG 186


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -2

Query: 237 PPEATHRKFVLCASSESLWFKRTLNVQLSA 148
           PP+   +  + C  ++  W+  T  +Q+ A
Sbjct: 60  PPDEETKCLIFCVGTDLRWWNNTCGLQVPA 89


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 340 YHTS*LC*PAINTTCITMSRGKTRLIVIKTQPSTVL 447
           YH   +  P I+ + +T+  G +RLI  +  P +V+
Sbjct: 130 YHYERVVSPGIDLSGLTLQSGPSRLIKDEYTPGSVV 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,977
Number of Sequences: 2352
Number of extensions: 11168
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)