Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0317
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121617-1|AAM51944.1|  620|Drosophila melanogaster GH03958p pro...    29   6.4  
AJ276682-1|CAB93141.1|  620|Drosophila melanogaster 15,15' beta ...    29   6.4  
AE014297-1742|AAF54978.1|  620|Drosophila melanogaster CG9347-PA...    29   6.4  
AB041507-1|BAA94508.1|  620|Drosophila melanogaster DRPE65 protein.    29   6.4  

>AY121617-1|AAM51944.1|  620|Drosophila melanogaster GH03958p
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/75 (26%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 SRCVVHLGLLVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           SR + H      +I Y    GKQ T   E        G   E      V    S++  F+
Sbjct: 421 SRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQ 480

Query: 174 RTLNVQLSAKITCDY 130
            T  +QL  ++ CD+
Sbjct: 481 GTNGIQLRPEMLCDW 495


>AJ276682-1|CAB93141.1|  620|Drosophila melanogaster 15,15' beta
           carotene dioxygenase protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/75 (26%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 SRCVVHLGLLVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           SR + H      +I Y    GKQ T   E        G   E      V    S++  F+
Sbjct: 421 SRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQ 480

Query: 174 RTLNVQLSAKITCDY 130
            T  +QL  ++ CD+
Sbjct: 481 GTNGIQLRPEMLCDW 495


>AE014297-1742|AAF54978.1|  620|Drosophila melanogaster CG9347-PA
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/75 (26%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 SRCVVHLGLLVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           SR + H      +I Y    GKQ T   E        G   E      V    S++  F+
Sbjct: 421 SRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQ 480

Query: 174 RTLNVQLSAKITCDY 130
            T  +QL  ++ CD+
Sbjct: 481 GTNGIQLRPEMLCDW 495


>AB041507-1|BAA94508.1|  620|Drosophila melanogaster DRPE65 protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 20/75 (26%), Positives = 29/75 (38%)
 Frame = -2

Query: 354 SRCVVHLGLLVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           SR + H      +I Y    GKQ T   E        G   E      V    S++  F+
Sbjct: 421 SRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQ 480

Query: 174 RTLNVQLSAKITCDY 130
            T  +QL  ++ CD+
Sbjct: 481 GTNGIQLRPEMLCDW 495


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,851,002
Number of Sequences: 53049
Number of extensions: 497772
Number of successful extensions: 1000
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)