Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0317
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-1|CAB04346.1|  284|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z81534-1|CAB04346.1|  284|Caenorhabditis elegans Hypothetical
           protein F37H8.1 protein.
          Length = 284

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 398 AVKPV*LL*KHSPRPYYDLKVIFPNHKEVSHGHV 499
           A  PV    +HSP P ++ KV+FP+  +VS+  V
Sbjct: 62  ASSPVTFETRHSPYPVHEQKVLFPSFSQVSNSMV 95


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 327 LVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           L + IDY+  G + +     +++   +   PP A HR FV+  SS+ ++ +
Sbjct: 682 LERLIDYHPVGPRYSNL--VIQALLVLLNAPPPAGHRLFVIATSSDRMFLR 730


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 327 LVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           L + IDY+  G + +     +++   +   PP A HR FV+  SS+ ++ +
Sbjct: 682 LERLIDYHPVGPRYSNL--VIQALLVLLNAPPPAGHRLFVIATSSDRMFLR 730


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 327 LVKNIDYYIFGGKQTTTDRELRSNTTVTGGPPEATHRKFVLCASSESLWFK 175
           L + IDY+  G + +     +++   +   PP A HR FV+  SS+ ++ +
Sbjct: 616 LERLIDYHPVGPRYSNL--VIQALLVLLNAPPPAGHRLFVIATSSDRMFLR 664


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,908,126
Number of Sequences: 27780
Number of extensions: 258906
Number of successful extensions: 626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)