Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0316
(695 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 24 1.0
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 4.2
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 5.5
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 5.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 9.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.6
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 7 STRESPPAARVSN-ENKTESFLPPE 78
ST E+PPA VSN +N+ + + P+
Sbjct: 452 STTEAPPAPAVSNPQNEVDGSVAPK 476
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 251 ALPFALLPRDRNP 213
ALPF LLP D P
Sbjct: 336 ALPFELLPLDSEP 348
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 417 TASFTMRSDDTCSNF 373
T +FT++SDDT N+
Sbjct: 135 TVTFTVQSDDTTLNW 149
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 5 KAPENPHQQHASPTKTKPNHSFLPKPSELRE 97
K ENP PTK P+P+++ E
Sbjct: 245 KELENPPTPKPRPTKVSRRKPRPPRPTQVEE 275
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 80 RSTPPLSTPSNSNATKS 96
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 13 RESPPAARVSNENKTES 63
R +PP + SN N T+S
Sbjct: 124 RSTPPLSTPSNSNATKS 140
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,735
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -