Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0315
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep... 37 0.40
UniRef50_Q76PT8 Cluster: D5L protein; n=12; Orthopoxvirus|Rep: D... 36 0.91
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4... 34 3.7
UniRef50_Q7REX9 Cluster: Putative uncharacterized protein PY0493... 34 3.7
UniRef50_A2ECR1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q557J4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_A5FAT0 Cluster: Putative uncharacterized protein precur... 33 6.4
UniRef50_Q636Z5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_Q7RBD2 Cluster: NAC domain, putative; n=7; Plasmodium|R... 33 8.5
UniRef50_A0DGS2 Cluster: Chromosome undetermined scaffold_5, who... 33 8.5
>UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep:
SJCHGC01974 protein - Schistosoma japonicum (Blood
fluke)
Length = 138
Score = 37.1 bits (82), Expect = 0.40
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 246 IY*YFYLCT*LKCKIYYLFTL*STRYLILSIYV-VKFSIF*XLCTTMLFTM*IKQIVYMY 422
+Y Y Y+C + C IY + Y+ +SIY+ + I+ + + + I +Y+Y
Sbjct: 49 VYMYIYICIYI-CYIYIYMYIYIYIYIYISIYIYIYIYIYVYIYIYIYIYICIYMYIYIY 107
Query: 423 TYLFHYISIFINYHI 467
Y++ YI I+I +I
Sbjct: 108 IYIYIYIYIYIYIYI 122
>UniRef50_Q76PT8 Cluster: D5L protein; n=12; Orthopoxvirus|Rep: D5L
protein - Variola minor virus
Length = 97
Score = 35.9 bits (79), Expect = 0.91
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 411 VYMYTYLFHYISIFINYHISNNRTTTSNIFF 503
+Y+Y Y++ YI I+I H+ NN+ SNIF+
Sbjct: 10 IYIYIYIYIYIYIYILKHMCNNQHHFSNIFY 40
>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 187
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +3
Query: 246 IY*YFYLCT*LKCKIYYLFTL*STRYLILSIYVVKFSIF*XLCTTMLFTM*IKQIVYMYT 425
IY Y Y+C + IY + Y+ + IY ++ +CT + + +YMYT
Sbjct: 71 IYPYIYICIYIYPYIYIYIYIYPYIYIYIYIYTYIYTHI-YICTYLYIYIYSFIYIYMYT 129
Query: 426 YLFHYISIFI 455
Y++ Y I+I
Sbjct: 130 YIYMYTYIYI 139
>UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4;
Plasmodium (Vinckeia)|Rep: Yersinia pestis AMVITR01,
putative - Plasmodium yoelii yoelii
Length = 440
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 296 SIYIVINSLFNFKYICC*VFDILIXMYNYAFYNVNKTNCLHVHLFISLYKHFYKLS 463
+I ++ SL+ KY + L + NY F N NK H+HL + +Y +F +++
Sbjct: 147 NIVTILISLYKLKYRNV---NFLKLVENYIFINKNKFKISHIHLILYIYAYFNRVN 199
>UniRef50_Q7REX9 Cluster: Putative uncharacterized protein PY04934;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04934 - Plasmodium yoelii yoelii
Length = 271
Score = 33.9 bits (74), Expect = 3.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 387 FTM*IKQIVYMYTYLFHYISIFINYHISNNRTTTSNIFFIRINLY 521
FT I I+Y+Y ++F YI + I+ I N NI +R +Y
Sbjct: 29 FTTDISLIIYVYIFIFFYIDLIISNDIKYNLVRKYNIKEVRKRIY 73
>UniRef50_A2ECR1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2819
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 584 KKSKQKILYTIDLQF*RTHVPIEIYPNKKYIRRGGSIITNMIIYKNAY 441
KKS +++ TI +T I + P K +G SII N++ Y N Y
Sbjct: 2382 KKSSEQLANTIRTSVLKTKEAIILVPYAKLDEKGRSIINNIVYYSNCY 2429
>UniRef50_Q557J4 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 124
Score = 33.5 bits (73), Expect = 4.9
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -3
Query: 623 SNKFVYKIYSTFKKKSKQKILYTID-LQF*R-THVPIEIYPNKKY----IRRGGS-IITN 465
+NK K YS KS I+Y ID L + + T+ I ++ N+KY I RGGS I N
Sbjct: 9 NNKLCIKYYSLMLYKSNVLIVYNIDTLSYEKYTNFKIPLHHNEKYAQSFIARGGSPIEPN 68
Query: 464 MIIYKNAYIMK*ISV 420
+ KN I IS+
Sbjct: 69 QVKKKNILIPILISI 83
>UniRef50_A5FAT0 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 169
Score = 33.1 bits (72), Expect = 6.4
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = -3
Query: 668 TCYKVTTIYPFIYRKS-----NKFVYKIYSTFKKKSK---QKILYTIDLQF*RTHVPIEI 513
+CY IYP YR + + VY + T KK+ K + L+T +T++ I++
Sbjct: 26 SCYSYK-IYPKEYRNAINTHVRETVYVVNDTLKKEFKILEKSNLFTFTKDSTQTNIKIKL 84
Query: 512 YPNKKYIRRGGSIITNMI 459
YP K+Y G +I +I
Sbjct: 85 YPIKQYPGCGNPLIAQVI 102
>UniRef50_Q636Z5 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus E33L|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ZK / E33L)
Length = 677
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 HYISIFINYHISNN-RTTTSNIFFIRINLYRNVCPL 539
HY+S+ I+Y+ NN +T SNIF + I+LY+ L
Sbjct: 422 HYMSVGISYYRLNNPKTFNSNIFKMAIDLYKKAYDL 457
>UniRef50_Q7RBD2 Cluster: NAC domain, putative; n=7; Plasmodium|Rep:
NAC domain, putative - Plasmodium yoelii yoelii
Length = 1004
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 290 LLSIYIVINSLFNFKY-ICC*VFDILIXMYNYAFYNVNKTNCLHVHLFISLYKHFYKLSY 466
LL I I++N +N+ Y I C + Y+Y F ++K C H++ F + + + Y
Sbjct: 705 LLYINIILNK-YNYLYHILCEISKYNDNFYSYEFIKISKQVCYHIYNFSNFFSKNKSIEY 763
>UniRef50_A0DGS2 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 608
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 408 IVYMYTYLFHYISIFINYHISNNRTTTSNIFFIRINLYRNVCP 536
I +Y FH +NY+ NN T+T N + I ++++ + P
Sbjct: 282 IEQVYYNGFHVFGYLVNYYQKNNPTSTFNKYMIGMSIFNGISP 324
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,747,993
Number of Sequences: 1657284
Number of extensions: 10136199
Number of successful extensions: 23904
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23709
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -