Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0314
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 40 0.002
AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical ... 33 0.24
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 31 0.72
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 31 0.72
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 31 0.72
AC024817-38|AAF59578.1| 608|Caenorhabditis elegans Hypothetical... 31 0.72
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 30 1.3
U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth... 30 1.3
AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopente... 30 1.3
Z68297-1|CAA92593.2| 222|Caenorhabditis elegans Hypothetical pr... 30 1.7
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23455-2|AAC46534.1| 423|Caenorhabditis elegans Hypothetical pr... 29 2.2
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 29 2.2
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.2
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.2
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 2.2
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.2
AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division... 29 2.2
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.8
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF025465-9|AAB71020.2| 136|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 69 LARYNNVGHLTCLLCTSVVRSENVWQVHLNSKQHRENIENAK 194
+A+ G++ CL+C + ++ + +W H+N K+HR++IE K
Sbjct: 7 IAKQKPNGNIQCLVCNAEIKPK-IWTAHVNGKKHRDSIEKLK 47
>AC024804-6|AAF60746.1| 162|Caenorhabditis elegans Hypothetical
protein Y51H7BR.3 protein.
Length = 162
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -3
Query: 547 LYIQSYEPLHLKLVIKKTFWYWYITCRFLFFFLICSLYRFINFFCYYNRI 398
++ S + L + L++ +W+I+ F F++ L R++ F Y+N +
Sbjct: 68 IFFNSKKKLPILLLLLTITLFWFISSIFALIFVLQDLKRYLRFHIYFNSV 117
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 84 NVGHLTCLLCTSVVRSENVWQVHLNSKQHREN 179
+V L C C ++SEN H+ SK+H+EN
Sbjct: 67 SVEPLYCKACRKSIKSENAMTDHVASKKHKEN 98
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 317 VPVITKPKN-DVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEPASDVPIPE 493
V V+ +N P+ + H E PVV E V+ + + KEE A D PE
Sbjct: 262 VEVVHVAENASTPAATDAHEETKSAEEQTPVVDASPAQEIVKVEEHEHKEEAAPDESAPE 321
Query: 494 GFFD 505
D
Sbjct: 322 AAHD 325
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 81 NNVGHLTCL-LC-TSVVRSENVWQVHLNSKQHRENIENAKKLKELTNNFTVVNKVKHKSS 254
+N+GH T L LC +S V+ N VH +H E+I K FT+ K +
Sbjct: 1750 SNLGHPTSLVLCESSSVQETN--NVHYQRDEHHEHISETKSYPRDGGKFTLDTKASTANE 1807
Query: 255 VLQKMHLPKKR*KE 296
V L KK +E
Sbjct: 1808 VRIDKDLEKKSDRE 1821
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 81 NNVGHLTCL-LC-TSVVRSENVWQVHLNSKQHRENIENAKKLKELTNNFTVVNKVKHKSS 254
+N+GH T L LC +S V+ N VH +H E+I K FT+ K +
Sbjct: 6596 SNLGHPTSLVLCESSSVQETN--NVHYQRDEHHEHISETKSYPRDGGKFTLDTKASTANE 6653
Query: 255 VLQKMHLPKKR*KE 296
V L KK +E
Sbjct: 6654 VRIDKDLEKKSDRE 6667
>AC024817-38|AAF59578.1| 608|Caenorhabditis elegans Hypothetical
protein Y54G2A.20 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 338 KNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEPA 472
+ND+ + EF+ E +++T + +V+ N P T Q PA
Sbjct: 481 RNDLNKIEEFYKEMLEQTGTSALVVRTDANGPTMTASQSMHMAPA 525
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 PPKDAPPEKKIKGILKXVGTVPVITKPKNDVPSVVEFHNEEIK-RTPLNPVVITEKVNEP 433
PP+ APP ++ L P P+ +VP V E K P TE
Sbjct: 625 PPRTAPPRTEVSMTLPPETVPPNTEAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEAPMTE 684
Query: 434 VQTTDQKEKEEPASDVPIPE 493
V T E P ++ P E
Sbjct: 685 VPMTGPSRTEVPMTEPPKTE 704
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 260 PKDAPPEKKIKGILKXVGTVPVITKPKNDVPSVVEFHNE-EIKRTPLNPV--VITEKVNE 430
P+ APP ++ L P P+ +VP E + TP + +T K E
Sbjct: 706 PRTAPPRTEVSMTLPPETVPPKTEAPRTEVPMTGPSRTEVPMTVTPETGLSSTVTSK-TE 764
Query: 431 PVQTTDQKEKEEPASDVP 484
P +TT +K + P ++VP
Sbjct: 765 PPKTTTEK-RITPRTEVP 781
>U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth
rate protein 1 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 96 LTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKE 206
L C +C + ++ WQ H++ K+H+ + + KKL E
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ-KKLAE 427
>AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopentenyl
transferase protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 96 LTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKE 206
L C +C + ++ WQ H++ K+H+ + + KKL E
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ-KKLAE 427
>Z68297-1|CAA92593.2| 222|Caenorhabditis elegans Hypothetical
protein F11A10.2 protein.
Length = 222
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 66 PLARYNNVGHLTCLLCTSVVRSENVWQVHLNSKQHRENI 182
P N++G C LC ++ +E + H K+H+ N+
Sbjct: 44 PYFMRNHIGTYECKLCLTLHNNEGSYLAHTQGKKHQANL 82
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 90 GHLTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKELT 212
G C +C VV+ + H+N K H+ NI + K K+ T
Sbjct: 88 GGFYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKST 128
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 3461 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 3507
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 3461 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 3507
>U23455-2|AAC46534.1| 423|Caenorhabditis elegans Hypothetical
protein F55E10.5 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 84 NVGHLTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKELTNNFTVVNKVKHKSSVLQ 263
NV HL CL ++ + + H N +H + + K + N T+ +K+ S +
Sbjct: 11 NVEHLVCLCVFLLLHFQKCCKKHKNVDRHFDILSEFLTYKYVVNAITLNLTIKYTSQKMN 70
Query: 264 KMH 272
+ H
Sbjct: 71 ETH 73
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defective
protein 45 protein.
Length = 1076
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 257 PPKDAPPEKKIKGILKXVGTVPVITKPKNDVPSVVEFHNEEIKR 388
PP+ P K G G PV++ PK D PSV E +E KR
Sbjct: 956 PPR--PASKADTGDKWERGVKPVVSPPKTDAPSVSEPKSEGPKR 997
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 3461 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 3507
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 329 TKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEPVQTTDQKEKEEP 469
TKP +P EF +E K L+ + + T+Q KEEP
Sbjct: 4006 TKPTGGLPETAEFQLDEFKALKLDVEHNASPLEAHLHATEQHLKEEP 4052
>AF039038-5|AAK29711.1| 604|Caenorhabditis elegans Cell division
cycle related protein25.1 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 440 TTDQKEKEEPASDVPIPEGFFDDQF*MQRFVRLNIKIQLKRNGKNSEKSXRRN*C 604
T + ++ EP S +P+ F +F R R + LK NG+ S + ++ C
Sbjct: 407 TAECRQICEPCSYIPMTHSSFSMEFKSARLERHHSMASLKPNGETSHREEKKKRC 461
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 254 RPPKDAPPEKKIKGILKXVGTVPVITKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVNEP 433
+PP P K + P ++ + +PS + E TP +PV I++ +P
Sbjct: 261 QPPIPPDPPSDPKSASVHIEESPPMSLASSTIPSDIIQSTPETG-TPRDPVKISQTSTKP 319
Query: 434 VQTTDQKEKEEP 469
V KEEP
Sbjct: 320 VSPESNSVKEEP 331
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 75 RYNNVGHLTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKELTNNFTVVNKV---KH 245
R++ GH TCLLC + + H+ S+ + + + N L N+T +N+V H
Sbjct: 200 RFHMTGH-TCLLCNRQIPENETVRDHMKSQHNIKKVYNC-----LCCNWTFLNQVHLISH 253
Query: 246 KSSVLQ 263
K+ + Q
Sbjct: 254 KTCLKQ 259
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 75 RYNNVGHLTCLLCTSVVRSENVWQVHLNSKQHRENIENAKKLKELTNNFTVVNKV---KH 245
R++ GH TCLLC + + H+ S+ + + + N L N+T +N+V H
Sbjct: 200 RFHMTGH-TCLLCNRQIPENETVRDHMKSQHNIKKVYNC-----LCCNWTFLNQVHLISH 253
Query: 246 KSSVLQ 263
K+ + Q
Sbjct: 254 KTCLKQ 259
>Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical
protein F55C9.3 protein.
Length = 167
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 153 LNSKQHRENIENAKKLKELTNNFTVVNKVKHKSSVLQKMHLPKK 284
+ K+H E + N KKL E TV + K S+ K H+PKK
Sbjct: 12 IKGKEHLEYLSNIKKLAE---TITVPTGIDVKISI--KKHMPKK 50
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +2
Query: 326 ITKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVN----EPVQTTDQKEKEEPASDVPIPE 493
I +P D+ VE + + P+ P + E++ E T Q+ P S++P
Sbjct: 1588 IPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVA 1647
Query: 494 GFFDDQF*MQRFVRLNIKI 550
DD RF LNIK+
Sbjct: 1648 KPLDDSKSRVRFAPLNIKL 1666
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +2
Query: 326 ITKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVN----EPVQTTDQKEKEEPASDVPIPE 493
I +P D+ VE + + P+ P + E++ E T Q+ P S++P
Sbjct: 1588 IPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVA 1647
Query: 494 GFFDDQF*MQRFVRLNIKI 550
DD RF LNIK+
Sbjct: 1648 KPLDDSKSRVRFAPLNIKL 1666
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +2
Query: 326 ITKPKNDVPSVVEFHNEEIKRTPLNPVVITEKVN----EPVQTTDQKEKEEPASDVPIPE 493
I +P D+ VE + + P+ P + E++ E T Q+ P S++P
Sbjct: 1588 IPEPLADLKLPVEDDEKTPEPEPVVPGQVQERIIPIEVEQAPTIPQRPPRAPKSELPKVA 1647
Query: 494 GFFDDQF*MQRFVRLNIKI 550
DD RF LNIK+
Sbjct: 1648 KPLDDSKSRVRFAPLNIKL 1666
>Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical
protein F33H1.5 protein.
Length = 371
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 290 KGILKXVGTVPVITKPKNDVPSVVEFHNEEIKRTPLNP 403
+G+L+ + + K +N V SVVE N+ K+ P NP
Sbjct: 320 EGLLRIISKTGIYRKQENRVSSVVEKFNQPPKQ-PTNP 356
>AF025465-9|AAB71020.2| 136|Caenorhabditis elegans Hypothetical
protein K02E7.11 protein.
Length = 136
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = -3
Query: 601 LVSSXTLL*IFPIPLQLDLYIQSYEPLHLKLVIKKTFWYWYITCRFLFFFLICSLYRFIN 422
L+S LL + P+ L D+ + LV+ + W+I+ ++ R++
Sbjct: 24 LISLFFLLGLAPVSLDFDIEFVHNAVRPILLVLVTINFLWFISSISALICVLQDQKRYLR 83
Query: 421 FFCYYNRI 398
F Y+N +
Sbjct: 84 FHIYFNSV 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,391,276
Number of Sequences: 27780
Number of extensions: 243137
Number of successful extensions: 1117
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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