Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0313
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 2.2
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 2.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 2.2
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 2.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 2.2
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.2
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.2
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 31 2.8
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 31 2.8
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 31 2.8
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 31 2.8
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 31 2.8
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 31 2.8
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 31 2.8
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 31 2.8
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 31 2.8
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 31 2.8
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 31 3.8
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 3.8
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 31 3.8
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 3.8
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 3.8
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 3.8
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 3.8
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 3.8
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 3.8
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 3.8
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 27 6.3
U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein. 30 6.6
BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding... 30 6.6
AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding... 30 6.6
AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding... 30 6.6
AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding... 30 6.6
AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein pro... 30 6.6
AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein pro... 30 6.6
BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain cont... 30 8.7
AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens ... 30 8.7
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRER----SETPRHRNKPSRP 193
R + +E + R +PR + S S R S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 122 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 153
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 274 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 305
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 763 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 794
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 292 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 387
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 877 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 933
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 740 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 796
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 192 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 248
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1844 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1900
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1565 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1621
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 351 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1890 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1946
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 27.5 bits (58), Expect(2) = 6.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 213 GDGASLSAPGSKRSLCRLRTPSVSRCAWA 299
GD AP +R L R PSVSR WA
Sbjct: 541 GDMQGWEAPAPQRPLTRPALPSVSRPHWA 569
Score = 21.4 bits (43), Expect(2) = 6.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +3
Query: 420 C*VPCYGQAPALWPAAPRVSMMAKR 494
C P Q A+W + PR S R
Sbjct: 579 CPRPSPAQKAAMWASTPRASAATTR 603
>U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein.
Length = 815
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 368 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 427
>BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 980
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding RS
protein protein.
Length = 1045
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein
protein.
Length = 980
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein
protein.
Length = 1045
Score = 30.3 bits (65), Expect = 6.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRVSACCRERSETPRHRNKPSRPVWSRRS 175
R+ SR Q H + H +K S+ R R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain
containing 49 protein.
Length = 425
Score = 29.9 bits (64), Expect = 8.7
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = -3
Query: 354 LRAVQSREQGHQDHHRGPA-----PRHSEKHSASEA---DRVSACCRERSETPR----HR 211
L A Q R G ++H R + PRH+ K S EA DR S RS +PR H
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRPSKLHN 303
Query: 210 NKPS-RPVWSRRSP 172
+K + R RSP
Sbjct: 304 SKVNRRETGQTRSP 317
>AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ20291 fis, clone HEP04788. ).
Length = 425
Score = 29.9 bits (64), Expect = 8.7
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = -3
Query: 354 LRAVQSREQGHQDHHRGPA-----PRHSEKHSASEA---DRVSACCRERSETPR----HR 211
L A Q R G ++H R + PRH+ K S EA DR S RS +PR H
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRPSKLHN 303
Query: 210 NKPS-RPVWSRRSP 172
+K + R RSP
Sbjct: 304 SKVNRRETGQTRSP 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,283,318
Number of Sequences: 237096
Number of extensions: 1940169
Number of successful extensions: 5519
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 5126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5512
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -